Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02254 ATGGCGGTTCCAGGGAGGCGCAATGGTCTCAACGACGACGAGGACGACAACTTCGAAGAGGACAACGCCCTCTTTGAAGAAAATGGCCTATTGGAGGTTGATGAATCGGATACGCCTCCTCATCTACGCGACCTGGCCGCCGCCTCTCAGTTTGGTGACCTCGATAGCCTCCGCCTCGCTCTAGATAACCTTACTGGAAGTATTGATGAACCTGTGGAAGATGGGGATACGGCTCTACATCTGACCTGCTTGTATGGCCATTTATCGTGTGTTCAGCTACTTCTGGAAAGAGGAGCGAACATGGAGTGTACAGATGAAGATGGAGCAATTCCATTACATGATGCTTGTGCAGGAGGGTATGCTGAGATAGTCCAACTGCTACTTAACAGAGCTGGTAATCCAGAGAATATAAGGAGGATGCTTGAATCAGTTGATTCAGAGGGTGATACACCGCTCCATCACGCTGCTAGAGGCGAGCATGTTGATGTCATTAGGTTATTGCTGTCTCATGGTGCATCTCCCACAAAGACAAACTTATATGGAAAGACCCCAGCAGAATTACCTGATCAGAGCACAGACGCAAGGAGATTGCTGGAAGCCGCTGTTGCTACTTCCACACCATCTCAATAG 630 0.4921 MAVPGRRNGLNDDEDDNFEEDNALFEENGLLEVDESDTPPHLRDLAAASQFGDLDSLRLALDNLTGSIDEPVEDGDTALHLTCLYGHLSCVQLLLERGANMECTDEDGAIPLHDACAGGYAEIVQLLLNRAGNPENIRRMLESVDSEGDTPLHHAARGEHVDVIRLLLSHGASPTKTNLYGKTPAELPDQSTDARRLLEAAVATSTPSQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02254 209 Pfam Ankyrin repeat 148 178 IPR002110 GO:0005515
Accr2g02254 209 ProSiteProfiles Ankyrin repeat profile. 107 139 IPR002110 GO:0005515
Accr2g02254 209 FunFam BRCA1-associated RING domain protein 1 39 206 - -
Accr2g02254 209 ProSiteProfiles Ankyrin repeat region circular profile. 74 106 - -
Accr2g02254 209 Gene3D - 39 206 IPR036770 -
Accr2g02254 209 ProSiteProfiles Ankyrin repeat region circular profile. 107 133 - -
Accr2g02254 209 SUPERFAMILY Ankyrin repeat 45 186 IPR036770 -
Accr2g02254 209 ProSiteProfiles Ankyrin repeat profile. 74 106 IPR002110 GO:0005515
Accr2g02254 209 ProSiteProfiles Ankyrin repeat profile. 147 179 IPR002110 GO:0005515
Accr2g02254 209 PANTHER SOWAH (DROSOPHILA) HOMOLOG 38 202 - -
Accr2g02254 209 Pfam Ankyrin repeats (3 copies) 46 130 IPR002110 GO:0005515
Accr2g02254 209 ProSiteProfiles Ankyrin repeat region circular profile. 147 173 - -
Accr2g02254 209 PRINTS Ankyrin repeat signature 75 90 IPR002110 GO:0005515
Accr2g02254 209 PRINTS Ankyrin repeat signature 163 177 IPR002110 GO:0005515
Accr2g02254 209 SMART ANK_2a 147 176 IPR002110 GO:0005515
Accr2g02254 209 SMART ANK_2a 107 136 IPR002110 GO:0005515
Accr2g02254 209 SMART ANK_2a 74 103 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02254 69 190 Ion Channels AT2G26650 30.137 4.16e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02254 - - qsa:O6P43_006603 318.931