Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02248 ATGGACTGCATCGTGGAGCCGCAGATGTTAACCCAGGGAGTTTCTCAGCTAGATGAAGGCTCTCTTTACGAGACAGGATCTGGCCATTACGGGTGTTCACACTATAGAAGGAGATGCAGGATAATAGCGCCATGTTGCAATGAAATATTCGATTGCAGACATTGCCATAATGAATCCAAGAACTCGATTGAACTGGATCCTGTTGATCGCCATGACGTTCCTCGTCACGATTTAAAGAGAGTTATCTGTTGCTTGTGTGGCACCGAGCAAGATGTTCAACAAATATGCATTCAGTGCGGTGTTTGCATGGGGAATTACTTCTGCTCCAAGTGCAAATTTTTTGATGATGATGTATCAAAGAATCAGTACCATTGCAATGAATGTGGTATCTGCAGAATTGGAGGCGAGGAGAATTTTTTCCATTGCAACAAATGTGGATGTTGCTATTCAATATTGTTGAAGAACTCGCACCGATGTGTTGAAAAAGCTATGCATCACAATTGTCCTGTTTGCTTTGAGTTTCTTTTTGACACCACAAAAGACATTACTGTATTACCATGTAGCCACACTATCCATCTGGAATGTGTGAGAGAAATGGAACAGCACCTCCAGTATTCTTGCCCTGTTTGCTCAAAATCATTTTGTGATATGTCGCGTGTTTGGGAGAGACTGGATCATGAGGTTGCATTAACACCTATGCCAGAAATATATCAAAATAAGATGGTCTGGATTCTATGCAATGATTGCGGGGAAACATCAGAGGTGAGCTTTAACATTTTGGCGCATAAGTGTATAAAATGCAAATCCTACAACACTAGACAGACACAAGGCGGACTTACATCATGCTCATCCAACATTGAAGAGATGCTGTAA 873 0.4158 MDCIVEPQMLTQGVSQLDEGSLYETGSGHYGCSHYRRRCRIIAPCCNEIFDCRHCHNESKNSIELDPVDRHDVPRHDLKRVICCLCGTEQDVQQICIQCGVCMGNYFCSKCKFFDDDVSKNQYHCNECGICRIGGEENFFHCNKCGCCYSILLKNSHRCVEKAMHHNCPVCFEFLFDTTKDITVLPCSHTIHLECVREMEQHLQYSCPVCSKSFCDMSRVWERLDHEVALTPMPEIYQNKMVWILCNDCGETSEVSFNILAHKCIKCKSYNTRQTQGGLTSCSSNIEEML 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02248 290 Gene3D - 239 283 - -
Accr2g02248 290 SUPERFAMILY CHY zinc finger-like 27 103 IPR037274 GO:0008270
Accr2g02248 290 Pfam Zinc-ribbon 215 273 IPR039512 -
Accr2g02248 290 Pfam CHY zinc finger 32 113 IPR008913 GO:0008270
Accr2g02248 290 ProSiteProfiles Zinc finger RING-type profile. 168 211 IPR001841 -
Accr2g02248 290 SUPERFAMILY RING/U-box 166 217 - -
Accr2g02248 290 Pfam zinc-RING finger domain 167 212 IPR001841 -
Accr2g02248 290 SMART ring_2 168 210 IPR001841 -
Accr2g02248 290 SUPERFAMILY Zinc hairpin stack 104 161 IPR037275 -
Accr2g02248 290 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 27 276 - -
Accr2g02248 290 ProSiteProfiles Zinc finger CTCHY-type profile. 103 167 IPR017921 -
Accr2g02248 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 213 IPR013083 -
Accr2g02248 290 ProSiteProfiles Zinc finger CHY-type profile. 25 101 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02248 Accr-Chr2 57410144 57412789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02248 30 273 C2H2 Transcription Factor Family AT3G18290 40.400 2.66e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02248 K10144 - zju:107431972 531.176