Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02245 ATGCTCCAATTAAACTGCATTGTGATATTCTTCATTCTGGGGTCATTTTCACCACTTGCAAGAGCAATGCTGAACCTCACTCTTCCTGGCCAGCATCCAGACCCCGATTCTGTCGTTCGAGAATTTCACAGGAAAGTGAATGCTTCCATAACGAGAAGGCAAATGCTAGCAGAGTCGCAGATACAAGAGTCGTCGTGCTTAACGGGGAACCCAATTGATGATTGCTGGAAATGCGACCCAGATTGGCCCAACAACAGGCAGAGATTAGCTGAATGTGCGATTGGGTTCGGGCAGTACGCCAAGGGAGGTCAAGGCGGCGAATTTTACATCGTCACCGACTCTTCTGACGACGACGCCGTCAACCCCAAACCTGGTACACTCCGATACGCCGTGATTCAGACGCAGCCACTGTGGATTGTGTTCCCCAGTAATATGATGATTAAATTGTCTCAGGAGCTCATTTTCAACAGCTACAAAACTATTGATGGCCGTGGCGCTGACGTTCACATTGTGGGCGGTGGCTGCATTACTCTCCAGTATATTAGCAATGTCATCATTCACAACATTCACATCCACCACTGTCACCCCTCAGGGGAGGCTAATGTGCGATCCAGCCCAGACCACTACGGGTGGCGAACAGAATCGGACGGCGACGGGATATCAATATTCGGGTCGAAAGACTTATGGATCGACCACTGCACGCTGTCTCGGTGCAAGGACGGGCTGATCGACGCCATCATGGGTTCGACGGGAATCACAATATCGAACAACTACTTCTCGCATCACAACGAAGTGATGCTTCTGGGCCACAGCGACGACTTCCAGCCGGACACCGGCATGCAGGTCACCATCGCCTTCAACCACTTCGGCGAGCAGCTGGTACAGAGGATGCCTCGCTGCAGGAGGGGATACATCCACGTCGTCAACAATGACTACACACACTGGGAGATGTACGCGATCGGAGGCAGCGGGAACCCTACGATCAACAGCCAGGGGAATCGGTACACGGCACCGACAAATCCGTTCGCGAAGGAGGTGACCAAGAGAGTGGACACGGAGGAAGGGAAGTGGAAGGGGTGGAATTGGAGATCCGAAGGGGACGTGATGGTAAACGGAGCATTCTTTGTGGCTTCCGGCGAAGGGGTGGAGGTTAAATATGAGAAGGCCTACAGTGTGGAGCCTAAGTCCGCCGACCACATTGATTTCCTCATAATGCACGCCGGCGTGCTCGGCGTTTCCAGGGATAACAATCTGGGGATGTGGAGCCGGGGGCGGAACGGAGAAGGGGATGGGATAGCTGTGACGGGACCTGAGTACACCGACGATATGGCGGGGACGACGAAGATGAAGGCGGAGTGGTTTGGGGGGTGTGTGATATGGTGCCTGATAGCATTCTTGTGGGGGTTGTTGTGTGAATTGTGA 1422 0.5338 MLQLNCIVIFFILGSFSPLARAMLNLTLPGQHPDPDSVVREFHRKVNASITRRQMLAESQIQESSCLTGNPIDDCWKCDPDWPNNRQRLAECAIGFGQYAKGGQGGEFYIVTDSSDDDAVNPKPGTLRYAVIQTQPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITLQYISNVIIHNIHIHHCHPSGEANVRSSPDHYGWRTESDGDGISIFGSKDLWIDHCTLSRCKDGLIDAIMGSTGITISNNYFSHHNEVMLLGHSDDFQPDTGMQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDYTHWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVDTEEGKWKGWNWRSEGDVMVNGAFFVASGEGVEVKYEKAYSVEPKSADHIDFLIMHAGVLGVSRDNNLGMWSRGRNGEGDGIAVTGPEYTDDMAGTTKMKAEWFGGCVIWCLIAFLWGLLCEL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02245 473 SMART amb_all 144 341 IPR002022 -
Accr2g02245 473 Gene3D - 69 411 IPR012334 -
Accr2g02245 473 PANTHER PECTATE LYASE 18-RELATED 30 413 IPR045032 GO:0030570
Accr2g02245 473 SUPERFAMILY Pectin lyase-like 64 397 IPR011050 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 318 337 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 92 109 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 216 237 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 152 168 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 360 384 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 389 412 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 116 141 IPR018082 -
Accr2g02245 473 PRINTS Pollen allergen Amb family signature 296 315 IPR018082 -
Accr2g02245 473 FunFam Pectate lyase 69 411 - -
Accr2g02245 473 Pfam Pectate lyase 153 333 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02245 Accr-Chr2 57320584 57322956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02245 1 445 Polysaccharide Lyase AT3G53190 75.724 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02245 K01728 - qsu:112022916 766.533