Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02238 ATGACGGATCCTTATGATTTCTCCCTGCACGGATACGCCGGAGTTCCAACGGCACAAATATTAGAAAGCGAAGAGGAATCTGCCGCTAGCGAAGAAGAAGAGGAGGATGATGACGAGGAGGAGGACGAGGACGAGGACCAGGCCGAAGAGTACATTCCGCTTGTACAGTCTCCTACGGCATTACAGGGCGTTCCTTCTACCTCCGACCAATATGATACCATAATTCAAGAGGTTCCGGATGATTGTGTTGAAGAAGAGGTAAACAAACGGCGGAGGACTGAAGGGGGAGAAACGTGTTCATCTTTGGGAATTGGGAGCCTTGACAGTAGTCAAGGGAACCGTGCTGACATTGATGGCTTGTATTGCCCCATTTGCCTGGAAGCTTGGACCAATGACGGTGAACACCATATCTGCTGTCTTCCGTGCGGGCACATATATGGTATGTCTTGCATCAAAAGGTGGCTTCAACAGCGGAAAAATTCTGGAAAGTGTCCACAGTGCAACAGGAAATGTGCATTGAGGGATGTGAGGAAACTCTATGCTTCACGTGTACTTGCTGCTGATGAAGAGTTACACAAGAAAATTCTGTCGCTTGAGGCCCGATGTGCTATTCTTGAAGGCAAGGGCTCTGACTGGAGCAAGAGAGAAGCAGCATGGAAGAAAAAAGAAGGCCAATTTCGTCTCAAAGTTAAGAAACTTACGGAGAGAAATACATATTTGGAGCAGCTGATACAAGATATGGAAAGAAGGAAAACTAGTGCCATGGAGGCAATTGGGAATTGTCGATGGGGATCTGAATCAAAACATGGCTTTGGGGCAAAGATAAATGGGAAAGGACATTGTTGCAATTTTGAATTGCAGAAAGAGTTTCAGCTAGGCAGTGCTCTTGTATTTGACATAAATGCTTCTAATCAAATTTTATTAATGGCACAAAGGCCAAAAGGGATAGGCGGACCCTACTTGTTAGCTAAAATGAGCTTGATACCTCCATATGAGATGGGAGATATCTTCCTGCCTTCTGGTTCATGTGCTATTAAAGATCTCCATATTTCCCCTTCAAATAGTGACCTGGCCCTTTATGCTTCATTAGGAAGGAAATTATCAGTACTCAGCATGGAGAGCAACAATGTGGTTGTCAATTATGATCTACAGGTTCCTGCTTGGTCATGTTCATGGGATCTCAGCAGTTCCCATAATGTATACGCTGGACTGCAGAATGGTTCTGTCTTGGTATTTGATTTGCGCCAAACTGCTGGGCCCATAAAATCCCTAAATGGGTTAACTAGCAACCCCGTTCATACTGTCCAGTCTCTTGTACAAGATTCCAGTCTTCCTTCAGGCGTTGGAACAATTCTATCTGCTTCTGCCATTGGCCTGTGTCAGTGGAACATAGGTGCTGAAGAGGGGCCGTGTATGATTCCTGAAACTGGTAGTAATGGGGTTTGTATATCTTTTGCTTATTGCCCGAGTAGTGATGATGTTGTCATATCATACCGTCCCAAATTTGACATGTCCACTGATGGGTCTCTCTCTCAACCATCTCTCAATCCATCCCAAGTTATACGACAAGGAGTCCAGGGCTCTCATGTTTTGTTCAAGAGACTTGGTGGAAGCCATTTTCAACCGTTGGGTTCCTCACGTGCCAATGTAAGTAACATTCGACTTCCAAAATGTGTAATAATGGATATAGAGAGTGAGAGCCGATGGTTAGCATCCGGAGATGAAGGTACATGTGAATTGGTCTTGCAAGAGTTGCCATCTTTTGGGGTTGTTCAGCGTTTGAAATTACCAGACCATGTGCGGGATCTGAAGTATTCTTCTACTCTGAATCATGGATTACTGGGATGTTTAACTGGAAAGTCATTGCAACTTTTCTGTACCAAACTCTCTTGA 1893 0.4464 MTDPYDFSLHGYAGVPTAQILESEEESAASEEEEEDDDEEEDEDEDQAEEYIPLVQSPTALQGVPSTSDQYDTIIQEVPDDCVEEEVNKRRRTEGGETCSSLGIGSLDSSQGNRADIDGLYCPICLEAWTNDGEHHICCLPCGHIYGMSCIKRWLQQRKNSGKCPQCNRKCALRDVRKLYASRVLAADEELHKKILSLEARCAILEGKGSDWSKREAAWKKKEGQFRLKVKKLTERNTYLEQLIQDMERRKTSAMEAIGNCRWGSESKHGFGAKINGKGHCCNFELQKEFQLGSALVFDINASNQILLMAQRPKGIGGPYLLAKMSLIPPYEMGDIFLPSGSCAIKDLHISPSNSDLALYASLGRKLSVLSMESNNVVVNYDLQVPAWSCSWDLSSSHNVYAGLQNGSVLVFDLRQTAGPIKSLNGLTSNPVHTVQSLVQDSSLPSGVGTILSASAIGLCQWNIGAEEGPCMIPETGSNGVCISFAYCPSSDDVVISYRPKFDMSTDGSLSQPSLNPSQVIRQGVQGSHVLFKRLGGSHFQPLGSSRANVSNIRLPKCVIMDIESESRWLASGDEGTCELVLQELPSFGVVQRLKLPDHVRDLKYSSTLNHGLLGCLTGKSLQLFCTKLS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02238 630 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 254 IPR013083 -
Accr2g02238 630 SMART ring_2 122 167 IPR001841 -
Accr2g02238 630 Coils Coil 21 41 - -
Accr2g02238 630 Coils Coil 230 250 - -
Accr2g02238 630 MobiDBLite consensus disorder prediction 1 66 - -
Accr2g02238 630 Pfam Ring finger domain 121 168 IPR001841 -
Accr2g02238 630 ProSiteProfiles Zinc finger RING-type profile. 122 168 IPR001841 -
Accr2g02238 630 SUPERFAMILY WD40 repeat-like 340 610 IPR036322 GO:0005515
Accr2g02238 630 PANTHER RFWD3 PROTEIN 25 628 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Accr2g02238 630 MobiDBLite consensus disorder prediction 25 50 - -
Accr2g02238 630 Gene3D - 332 511 IPR015943 GO:0005515
Accr2g02238 630 SUPERFAMILY RING/U-box 117 172 - -
Accr2g02238 630 CDD mRING-C3HGC3_RFWD3 118 180 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02238 121 173 C3H Transcription Factor Family AT1G51930 44.444 2.26e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02238 K15691 - qsa:O6P43_006620 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02238 2 57241775 57246005 Accr2g02238 2 57241775 57246005 ECH