Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02236 ATGGGTAGAGCTCCTTGCTGCGATAAGGCCAATGTCAAGAAGGGACCCTGGTCTCCTGAAGAAGATGCTCAGCTAAAGGAGTACATAGAGAAACATGGAACGGGAGGCAACTGGATTGCTCTCCCTCAAAAAGCTGGTCTCAAAAGATGTGGGAAAAGCTGTAGACTAAGATGGCTCAACTATCTCCGACCTGACATCAAACACGGCGAGTTCTCCGATCATGAAGATAGAATCATCTGCAGCCTCTTTGCTAGCATCGGAAGCAGGTGGTCAGTGATAGCATCTCAGTTGCCTGGAAGGACTGATAACGATATTAAGAACTACTGGAACACCAAGCTTAAGAAGAAGACGATAGGCTTCAATATTAATCCTTCACCTCCTCATCATCATCGCCAAGGTACCCTTTTGCGGCTTCTCCAAAATTCAACTCCTTCTTCATCCTCATCATCAGCTTCTTCACCATTATCATCATTCACTGACAACAACACCATCAATTCCTCTTACCGTCACCCAGCTACTTATGTTTCTTCGTTCTCAGGCGCTGATCACCCCATTTCCTTATTTTCGTCTGCGAGATTCTTGAACGGCCACTCCTCTGCTTGTGATTCTGCTGCAGCTGACTCTTTCTATCAACCCCAAGAAAGCGTGATGGGTCCGATTGATCTAGTCTCAGCTAGTTGCAGCCAGATGAGTCATCGTGTGAAAGAAGCTGAGGCTACTGCTACTGGATATAATGGAGTAGGCAAAGGAACTATAGGGGAACAGATGATAGCTGCCAATGATAACTATGATTACCTGCACAATATTGGGATTGAAATTAAGGAAGAAACTCAGAAGGTGATGATGTATGATATCGACTACGTGAATGGACTGTGGGAAGAGAATCCGCCACTAGATTATGGGATAGAAGAAATCAAGCAGCTAATAAGTTCTACTAATAGCTGCAACAACTTTTTGTTTGATGACAACATGACACATACAAGGGCCTTGTTCTACCACTGA 1002 0.4451 MGRAPCCDKANVKKGPWSPEEDAQLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPDIKHGEFSDHEDRIICSLFASIGSRWSVIASQLPGRTDNDIKNYWNTKLKKKTIGFNINPSPPHHHRQGTLLRLLQNSTPSSSSSSASSPLSSFTDNNTINSSYRHPATYVSSFSGADHPISLFSSARFLNGHSSACDSAAADSFYQPQESVMGPIDLVSASCSQMSHRVKEAEATATGYNGVGKGTIGEQMIAANDNYDYLHNIGIEIKEETQKVMMYDIDYVNGLWEENPPLDYGIEEIKQLISSTNSCNNFLFDDNMTHTRALFYH 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02236 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Accr2g02236 333 PANTHER OS09G0431300 PROTEIN 1 208 - -
Accr2g02236 333 CDD SANT 16 62 IPR001005 -
Accr2g02236 333 Gene3D - 69 134 - -
Accr2g02236 333 FunFam Transcription factor RAX3 7 68 - -
Accr2g02236 333 SMART sant 67 115 IPR001005 -
Accr2g02236 333 SMART sant 13 64 IPR001005 -
Accr2g02236 333 Gene3D - 7 68 - -
Accr2g02236 333 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Accr2g02236 333 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Accr2g02236 333 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Accr2g02236 333 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Accr2g02236 333 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Accr2g02236 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02236 Accr-Chr2 57211380 57212662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02236 1 130 MYB Transcription Factor Family AT2G36890 81.538 2.72e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g02236 Myb_DNA-binding 1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02236 K09422 - gmx:778084 324.709