Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02210 ATGGCTCGCATAGAAAGTCCAATGTCGAAGCCAGGTTATAAGATGAATGCAAGAAACATGTTGATGCAGAGAGAAAACCTTTCAAGGGTGTTTTCTGAGGATTATGATGCCTCGAAGAAGAAGATATTCGATCCGAGGGGACCAAGAGTAAACAGATGGAACAAAATTTTCTTAGTAGCATGTCTGATTTCACTATTTGTGGATCCCTTCTTCTTTTATGTGCAAGAGGCTAAGAAAGACAAGTGCATTGCTACATCTGCGCGACTCGAAGTTGCCCTTACCACAATTCGGTCCATGGTTGATGCATTTTACATCATTCATATGCTTATTCGGTTTCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGGTAGAGGAGAGCTAGTTATAGACCCTTCAAATATTGCATCAAGGTACCTCCAAAAAGACTTCTGGCTTGATCTTCTGGCAGCCCTCCCTCTTCCCCAGGTGTTGATTGTAGCTGTAATTCCAAATCTAAGGGGCTCAGAAATTATTGCTTCAAGGGAGACTCTGCGCCTTGTGATCATTTTCCAATACCTGTTAAGGTTATATCATATCTTCCCTCTTTCATCTGAAATAGTTAAGGCAAATGGAGTAATGATGGAAAAAACATGGGCTGGGGCAGCATATTACCTTATGCTCTATATGCTAGCAAGTCATGTCTTAGGATCTTCCTGGTACCTGTTGGCAATAGAGAGGCAGGATGAATGTTGGAAAAAAGCTTGTAACTTTGAGTTCCCATATTGTCAATACGGTTATCTTGATTGCCAAAGTATAAGTGATCCAGCCAGAGCAGCCTGGTTTAGATCAAGCAACCTGTCAACTTTATGTGATAAGAACAGTGATTTTTTCCAGTTTGGTATTTTTGCCGATGCTCTCACTTTGGAAATGGCAGACTCAAAGTTCTTAAGCCGATATTATTATTGTCTATGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCCTAACCAGCACTAACGTTGGAGAGATAAATTTTGCTGTGATTATTGCAATTCTTGGGTTGGTGCTTTTTGCACTTCTAATAGGAAACATGCAAACGTACCTGCAATCCACTACTAGGCGACTGGAAGAATGGAGAATAAGACGCACAGATACAGAACGATGGATGCATCACAGGCAGTTACCCCATCACTTGAAGCGAAGTGTGAGACGCTATGAGCAATTCAGATGGGTTGCTACGCGAGGAGTTGACGAGGAATCCATCCTCCGAGACCTCCCTGTCGATATCAGACGCGACATCAAACGCCACCTCTGCCTCAACCTTGTCCGACAAGTGCCCCTGTTTGATCAGATGGACGAGAGGGTGCTAAACGCAATATGTGAAAGACTGAAACCTTCTCTGTGTATTCAAGGAACACTCCTTGTTCACGAAGGAGATCCTGTGACTGAAATGCGCTTTATAATTCGAGGACGTTTAGATTCTTGTACAACTAATGGTGGCAGAACCGGGTTCTTCAACTGTTGTAAAATCGGACCGGGTGATTTTTGTGGGGAGGAGCTATTGCCATGGGCTCTGGACCCACGTCCAAGTGCTGTCCTTCCTTCATCAACTCGCACAGTGAAAGCCCTAACAGAAGTGGAAGCTTTCGCGCTCGTAGCCGAAGATTTAAAATTTGTGGCAGCTCAGTTCAGGAGACTACACAGCAAGCAACTGAGGCACACGCTCAGGTTTCATTCGCATCAATGGAGGGCGTGGGCTGCTTGTTTCATACAAGCGGCTTGGTTCAGATATAAGAGAAGGAAAGGGACGAGTGAGCTTAATCATGAGGAGTACTTTGGTGATGCTGGTGAAACTAAGGTGGGACATTTCTCTGAGCCTTTATACTTGCAACCTCGGAAAGGTTCGAGTGCTACGATGAATAAATTGGCTAAGTTGGGATGTAGCCCCAGGAAAGGTGGAAGCTTGCCATATGGTTCTGACTTTTATATTCTTGGTTCACCCAGGAAGCCCCTTGAACCTGACTTTAGTACTGTTGAAGATTAA 2037 0.4433 MARIESPMSKPGYKMNARNMLMQRENLSRVFSEDYDASKKKIFDPRGPRVNRWNKIFLVACLISLFVDPFFFYVQEAKKDKCIATSARLEVALTTIRSMVDAFYIIHMLIRFQTAYVAPSSRVFGRGELVIDPSNIASRYLQKDFWLDLLAALPLPQVLIVAVIPNLRGSEIIASRETLRLVIIFQYLLRLYHIFPLSSEIVKANGVMMEKTWAGAAYYLMLYMLASHVLGSSWYLLAIERQDECWKKACNFEFPYCQYGYLDCQSISDPARAAWFRSSNLSTLCDKNSDFFQFGIFADALTLEMADSKFLSRYYYCLWWGLRNLSSLGQNLLTSTNVGEINFAVIIAILGLVLFALLIGNMQTYLQSTTRRLEEWRIRRTDTERWMHHRQLPHHLKRSVRRYEQFRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMDERVLNAICERLKPSLCIQGTLLVHEGDPVTEMRFIIRGRLDSCTTNGGRTGFFNCCKIGPGDFCGEELLPWALDPRPSAVLPSSTRTVKALTEVEAFALVAEDLKFVAAQFRRLHSKQLRHTLRFHSHQWRAWAACFIQAAWFRYKRRKGTSELNHEEYFGDAGETKVGHFSEPLYLQPRKGSSATMNKLAKLGCSPRKGGSLPYGSDFYILGSPRKPLEPDFSTVED 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02210 678 SMART cnmp_10 445 576 IPR000595 -
Accr2g02210 678 SUPERFAMILY cAMP-binding domain-like 374 567 IPR018490 -
Accr2g02210 678 Gene3D Helix hairpin bin 372 436 - -
Accr2g02210 678 FunFam Cyclic nucleotide-gated ion channel 1 443 561 - -
Accr2g02210 678 SUPERFAMILY Voltage-gated potassium channels 44 367 - -
Accr2g02210 678 Gene3D - 54 369 - -
Accr2g02210 678 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 623 - -
Accr2g02210 678 Pfam Ion transport protein 53 372 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr2g02210 678 Gene3D Jelly Rolls 443 563 IPR014710 -
Accr2g02210 678 ProSiteProfiles cAMP/cGMP binding motif profile. 445 530 IPR000595 -
Accr2g02210 678 PRINTS EAG/ELK/ERG potassium channel family signature 314 331 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr2g02210 678 PRINTS EAG/ELK/ERG potassium channel family signature 358 367 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr2g02210 678 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr2g02210 678 PRINTS EAG/ELK/ERG potassium channel family signature 408 415 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr2g02210 678 PRINTS EAG/ELK/ERG potassium channel family signature 340 351 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr2g02210 678 PRINTS EAG/ELK/ERG potassium channel family signature 225 235 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr2g02210 678 CDD CAP_ED 445 576 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02210 Accr-Chr2 56969781 56972452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02210 15 610 Ion Channels AT2G28260 67.617 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02210 K05391 - gmx:100815543 1008.44