Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02201 ATGAAGATTCCTCGTTCGTTTCTGGCTTGTTTCTCACCTTCAGTCAATGAACCAAGTCACCTAGATGATGACTCAGAAGGAGGCAGTGATGGTGAAGCATTTCGTGTATTCTCTGGCAGCGAATTGGAATTAGCCACTCGAGGTTTCAATTCCTGGGACAAGGTTGGAGAAGGCGGATTCGCTTCTGTTTACAAGGGGCAGCTTCGGAACGGTCATGTTGTGGCTGTGAAAGTGCTTTCAATCGAACTAGAATCCATGCGAGGAGAAATGGAATTCGTGGCAGAATTGGCCACACTGTGTCGTATCAAGCACGAAAATCTAGTTAGTCTTAGAGGGTGTGCTGTCGAGGAAGGCCGAAGATATTTGGTCTTCGATTACATGGAAAACAATAGCCTCTCCCGCACTTTTTTAGCCACAGAGGAAAGAAGGATGAAATTTAGATGGGAATTGAGGAGCAACATATCTATAGGGGTGGCACGTGGCCTTGCCTATCTCCACGACCAACTAAAACCTCACATTGTCCATCGAGATATCAAACCCAGCAACATCCTCCTTGATCATAACTTCACACCAAAACTATCTGACTTTGGCTTCGCCAAGCTATTTAGGGACGACAGGTCTTACGTCAGTACTAGAGTCGCTGGCACGTTGGGCTATCTTGCTCCTGAGTATGCCACTACTGGGAAGTTGACACGGAAGTCAGATGTTTATAGCTTTGGAGTATTACTCTTACAAATTGTTAGCGGCCAAGCAGTAGTTGATGCTGATCAGGATACGGATCGTTTCCTGGTAGAGAAGGTGTGGGCAGCTTATAAAGCTAACGAGCTAGTAAATATGGTGGATCCGGTAATTACAAATCTGAGCTTGGTGGCAGAAGAAGCCGTTAGGTTCCTAAAAGTGGGGCTACTTTGCGTGCAAGAAACCGCCAGGCTTCGGCCAAGAATGACAGAGGCCGTTGAGATGTTGACTAATAGCAGCAGTATTATTAATGACATGGAAGGGGTTGCTATTTCAAAACCAGGCTTTGTTGCTGATCTCAGAAACATCAAAATAAGGCAGCAAATACCTGTGAGTCCCGAATCTAATTCAAGTGGAACCAACCAGAGTCTTTGGAGTTCCCTCATTCTGGCCCGTTAA 1137 0.4582 MKIPRSFLACFSPSVNEPSHLDDDSEGGSDGEAFRVFSGSELELATRGFNSWDKVGEGGFASVYKGQLRNGHVVAVKVLSIELESMRGEMEFVAELATLCRIKHENLVSLRGCAVEEGRRYLVFDYMENNSLSRTFLATEERRMKFRWELRSNISIGVARGLAYLHDQLKPHIVHRDIKPSNILLDHNFTPKLSDFGFAKLFRDDRSYVSTRVAGTLGYLAPEYATTGKLTRKSDVYSFGVLLLQIVSGQAVVDADQDTDRFLVEKVWAAYKANELVNMVDPVITNLSLVAEEAVRFLKVGLLCVQETARLRPRMTEAVEMLTNSSSIINDMEGVAISKPGFVADLRNIKIRQQIPVSPESNSSGTNQSLWSSLILAR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02201 378 Gene3D Transferase(Phosphotransferase) domain 1 127 335 - -
Accr2g02201 378 FunFam Cysteine-rich receptor-like protein kinase 2 127 330 - -
Accr2g02201 378 CDD STKc_IRAK 55 324 - -
Accr2g02201 378 Gene3D Phosphorylase Kinase; domain 1 24 126 - -
Accr2g02201 378 Pfam Protein kinase domain 52 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02201 378 ProSiteProfiles Protein kinase domain profile. 49 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02201 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Accr2g02201 378 SMART serkin_6 49 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02201 378 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Accr2g02201 378 SUPERFAMILY Protein kinase-like (PK-like) 33 322 IPR011009 -
Accr2g02201 378 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02201 Accr-Chr2 56875788 56877517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02201 36 345 Receptor kinase-like Gene Family AT1G56120 44.373 9.21e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr2g02201 Pkinase 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02201 - - gmx:100813945 466.463