Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02191 ATGGAGAAAGATCCTAACTTGGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCAGACGAAGAGCTCATTGTTCACTACCTCAGAAACAAAGCAACTTCATGTCCCCTCCCAGCTTCATTCATCGCAGACATAGATCTCTATAAGTTCAACCCATGGGAGCTTCCAAGCAAAGCTTTGTTTGGAGAGGATGAGTGGTTCTTCTTTACTCCGAGGGACAGGAAGTATCCGAATGGATTGAGGCCAAACAGAGCAGCAGGGTCAGGTTATTGGAAGGCTACGGGGACTGATAAACCAATTCTTAGTTCGTGTGGAATGAAGAGCGTTGGAGTGAAGAAAGCCCTCGTGTTCTATAAGGGTCGTCCACCTAAAGGATCTAAAACCGATTGGATCATGCATGAGTATAGGTTGCTCGATTCAATTATCTTGAGTTACAAGCAAAGAGGATCTATGAGACTGGATGATTGGGTGCTGTGCAGGGTTCGACAAAAAATCAGCAGCCCTAGAAGCACTTGGGAGGAGTCGAATGAAACTAGTAATAATGAACCTGCAAGCTACTTTCAACCGATGAATAATTATGAGATTCATTATGATGCTGATGAAACTGTCAAAAACAGTGTGTTCAATGAGTTTCCCATGTTGCCATTTATTCTAGGATCTAAGACGAATAATTCTCTTCCCTGCATGGCAAATGCAACATCAAGCTTAAGCTACCAGCGTACAGATAATGCTTTTGTCCATGAAGACACCTCAAACATAGAAGCAGCACAGTTCTCAGAATCTCCTGATGATGAGAGCTTGAAGAGAAAGCTCTGTGAACATAACCAAATGAATCTTTTTGATTCTCCTCCCTTTAAGAAGCTAAGAGGGGAAGATCATGAGAGGGACATGCTAGCAATAGACATAAGCAAAAGCTACAGCAGTGGTTTCAGCAGCTTTAATCATTGGAATGCCATCATACAGCCTCAAGAGCTTAATAACTTGGCCTTCGCAGGATATATTTGA 1008 0.4266 MEKDPNLEIQLPPGFRFHPSDEELIVHYLRNKATSCPLPASFIADIDLYKFNPWELPSKALFGEDEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGTDKPILSSCGMKSVGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSIILSYKQRGSMRLDDWVLCRVRQKISSPRSTWEESNETSNNEPASYFQPMNNYEIHYDADETVKNSVFNEFPMLPFILGSKTNNSLPCMANATSSLSYQRTDNAFVHEDTSNIEAAQFSESPDDESLKRKLCEHNQMNLFDSPPFKKLRGEDHERDMLAIDISKSYSSGFSSFNHWNAIIQPQELNNLAFAGYI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02191 335 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Accr2g02191 335 FunFam NAC domain-containing protein 72-like 20 170 - -
Accr2g02191 335 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
Accr2g02191 335 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Accr2g02191 335 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Accr2g02191 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02191 Accr-Chr2 56826576 56827805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02191 10 174 NAC Transcription Factor Family AT1G61110 69.364 8.61e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g02191 NAM 1.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02191 - - lja:Lj1g3v4579400.1 407.912