Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02189 ATGGGACATAGACATTTATATAGCATATCTCAGATGTTTGGTAGTGAGCATGAGCAGAATTGGAATTATATGCATCCTGATCAACAGAATGTGCAACTAGGTAGGGCTAGCAGTTCAGAGAATGGTTCTTTTATTCATCCCCTAGAAAATATGTCTATAGATGGCAGCTCTTTGGCTGCTCCTTGGAACAATGCCACCATGTCAAATGGATATGCATCCTCAAGTATCAACATTGAACTACCCCCTCGTCAATCAGATGCATCAAGATCTTCTCATGATCATTTTTTGCATTCATCAAATCCTGGAGCCTTTTTTGCAGTTTCTGAAAACTATTCTTGCCAGCCTTCTTCCAATTATGATAGACAAGCATTTCATGTTGCCGATGGTGATTTCTTTGATTTTACAATGGGAAGCGGAAGAGGGCCTCAGAAGCGAAAGAGCCCTGGAATTCCTTCAGTGAGTGAGAGAGGCAGCTCAAGTAGATATTTCGGTTCAGGAAGCTCAACTGATCTCCCTATATCTTCAGAAATAAGGCAGGAGAAGCCAAGCTTGGATTCTCAATATCTTCCTTGGGATCATGTTACTATGACACCCCCCTTCAGAGGCAGTGGCCTTTCAATCAGGGGTGATGGTTCTTTAAGGAATGTTAGAAGTCGTTCTGCACTGGATTTGGAATCCAACCTTGCTAGGACGCATTTATCTGACAACCATTTGCACAACTTACCTTTTGGCCCATCCACTGACCATTCTAGCGCAGTGGGTCTTTCTGGTCATAGTTCTAGTACTATGACAATGGACTGGAGCCAAATGAACATGTCTCCTGCTCATGGGAGTGTATTATTATCTGAATCAAGTGGATATAATCATGAGCCAAGTCGCTTGCTAGTTGGAAGCGGTGCTAGCAATGCTTCAGTGGATGCTGGGAGTTACCATCACGAATATAATACGAGCATAAATCCTACTGTTCCTCAAAGTTTTCACAGTAACCCCACTCACCCTGCTAGGGGAGTTCGAAGTAACTATTCCCATAGATCTGCTCCAACACCAACTCCAACTTTTAGAGCCTCTTCAAGCTCACGTGTGGGACATATGGTGCCTTCAGATGGTGGATTGCACATGGGAGCTGAAGGTTTTATGTCTAGACAACCAAGATCCTTGACTGCCATCACTTGGCGGAATAGTGATAGAAATGGGAGGTCAAGGGCATCTAACGAGAGTTATCAATCATTGGCTGACGAGGCAATTCTTCATGATCGATTTTCCTCTGAGGGTTTCATGGCTGTTGATCGTGTGCCACTGTATGGTTCTCGAAATATGATTGATCAGCATAGAGATATGAGGATGGACGTAGACAATATGAGTTACGAGGAACTACTTGCTCTGGGAGAGAGGATTGGTCATGTCAGCACAGGATTGTCAGGGAACTTGATTTCCAAGTGTTTGACAGAATCAATATATTGTTCATCTGAGCAGAGTCAAGAGGAAGGAAGTTGTGTCATCTGCCTGGAAGAGTACAAGTACATGGACGATGTTGGGACATTGAGAAGTTGCGGCCATGACTATCATGTGAGCTGCATTAGAAAGTGGTTGTCTATGAAGAACATATGTCCTATCTGCAAAGCCTCTGCTCTTCCTGATGAAATGAAGGATAAATAA 1656 0.4342 MGHRHLYSISQMFGSEHEQNWNYMHPDQQNVQLGRASSSENGSFIHPLENMSIDGSSLAAPWNNATMSNGYASSSINIELPPRQSDASRSSHDHFLHSSNPGAFFAVSENYSCQPSSNYDRQAFHVADGDFFDFTMGSGRGPQKRKSPGIPSVSERGSSSRYFGSGSSTDLPISSEIRQEKPSLDSQYLPWDHVTMTPPFRGSGLSIRGDGSLRNVRSRSALDLESNLARTHLSDNHLHNLPFGPSTDHSSAVGLSGHSSSTMTMDWSQMNMSPAHGSVLLSESSGYNHEPSRLLVGSGASNASVDAGSYHHEYNTSINPTVPQSFHSNPTHPARGVRSNYSHRSAPTPTPTFRASSSSRVGHMVPSDGGLHMGAEGFMSRQPRSLTAITWRNSDRNGRSRASNESYQSLADEAILHDRFSSEGFMAVDRVPLYGSRNMIDQHRDMRMDVDNMSYEELLALGERIGHVSTGLSGNLISKCLTESIYCSSEQSQEEGSCVICLEEYKYMDDVGTLRSCGHDYHVSCIRKWLSMKNICPICKASALPDEMKDK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02189 551 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 140 544 IPR045191 GO:0061630
Accr2g02189 551 MobiDBLite consensus disorder prediction 135 174 - -
Accr2g02189 551 SUPERFAMILY RING/U-box 488 544 - -
Accr2g02189 551 SMART ring_2 498 539 IPR001841 -
Accr2g02189 551 MobiDBLite consensus disorder prediction 152 174 - -
Accr2g02189 551 ProSiteProfiles Zinc finger RING-type profile. 498 540 IPR001841 -
Accr2g02189 551 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 463 544 - -
Accr2g02189 551 Pfam Ring finger domain 497 540 IPR001841 -
Accr2g02189 551 CDD RING-H2_RNF24-like 498 543 - -
Accr2g02189 551 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 464 544 IPR013083 -
Accr2g02189 551 MobiDBLite consensus disorder prediction 320 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02189 Accr-Chr2 56802882 56805509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02189 1 550 C3H Transcription Factor Family AT2G37150 41.681 5.88e-110 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02189 - - gmx:100803627 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02189 2 56802882 56805509 Accr2g02189 2 56802882 56805509 ECH