Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02175 ATGGGGAGGAAGGGAAGTTGGTTTTCTACTGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAGATCAGAAATCAAGCCAATCAAAGAAGAAATGGTTTGGGAAGAAAAAATTGGAGATCTCCTCACATTCATACGTGGGTTCTGAGAAAACAGAACACCCCCCTGCTCCTCCACCTGAAGAAATTAAATCATACAATGTTGAGAATGAAGCCAGCCAAAGCCATGTTCTTGAAGTTTCAACTGCTGTGGAAGCTGAGAGACCAATCCCTGCCATTCAGAGACCAGTTGTTGCAATTCAAGCCCCTAAAATCTCTCGGTTTGCCGGTAAATCAAGGGAAGAGGTTGCTGCAATAAAGATTCAGACAGCTTTTAGGGGCTATCTGGCAAGAAGAGCTTTGCGAGCTCTAAGAGGGCTAGTCAGATTGAGGAAAGTAATGGAAGGACCAATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAGCTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGATCAGGATGTTCGAGGAGAATCAGGCTCTGCAAAGACAGCTCTTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGAAGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAAATTGAAGCCAAGTTACTACAAAAGTATGAGGCAGCCATGAGAAGAGAAAAAGCTCTGGCATATGCATTCACTCATCAGCAAACATGGAAGAATTCAGCCAGATCAATAAACCCAATGTTCATGGATCCAACAAATCCTACATGGGGCTGGGGCTGGCTGGAACGGTGGATGGCAGCTCGGACATGGGAGAGCCGAAGCACAATGGAGAAAGAAATGAACGATGACCGTTCATCTGTGAGAAGTTGTAGCCGCAGCGTCACCGGCGGCGGAGAAATCAGCAAATCATATGCTCGTTACCAACTCAATTCTGAAAAGCAATCTCCCTCAGCAAGCCAAATCAACGACTCACCTAGCTTCAGATCATACTCAACTCCTTCAAAGCCAGCTTCCAGAAAACTCAAGCATGCTAGCCCAAAGAACAGTTTTGCAATGGATGATGATGTTAGAAGTTCGGCCAGTGCGCAGTCAGGGAGGTTCCGGCGGCATTCCATTGGTGGCGCGTCGGTTAGAGACGACGAGAGCCTTGCGAGCTCGCCGGCCGTTCCGAGTTACATGGTGGCGACTCAGTCTGCAAAAGCTAAGTCCAGGACGCAGAGTCCATTGGCAGCTGAGAATAGCACGCCACAGAAGGAGAGAGATAAAGGGTCTTTTGGGACTGCAAAGAAACGGCTTTCTTACTCGCCGTCGCCGGCGAGGCCACGGCGGCATTCGAGTGGCCCACCGAAGATAGAAAACAACTTAAATGCAGAAATCACTATGGGTAATGGTGGGGCTGCTTAA 1434 0.4791 MGRKGSWFSTVKKAFSPESKKKEDQKSSQSKKKWFGKKKLEISSHSYVGSEKTEHPPAPPPEEIKSYNVENEASQSHVLEVSTAVEAERPIPAIQRPVVAIQAPKISRFAGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLRKVMEGPIVKRQATSTLRSMQALARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIEEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSARSINPMFMDPTNPTWGWGWLERWMAARTWESRSTMEKEMNDDRSSVRSCSRSVTGGGEISKSYARYQLNSEKQSPSASQINDSPSFRSYSTPSKPASRKLKHASPKNSFAMDDDVRSSASAQSGRFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENSTPQKERDKGSFGTAKKRLSYSPSPARPRRHSSGPPKIENNLNAEITMGNGGAA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02175 477 MobiDBLite consensus disorder prediction 319 477 - -
Accr2g02175 477 MobiDBLite consensus disorder prediction 1 37 - -
Accr2g02175 477 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Accr2g02175 477 Gene3D iswi atpase 112 150 - -
Accr2g02175 477 MobiDBLite consensus disorder prediction 286 306 - -
Accr2g02175 477 MobiDBLite consensus disorder prediction 399 424 - -
Accr2g02175 477 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Accr2g02175 477 MobiDBLite consensus disorder prediction 15 37 - -
Accr2g02175 477 MobiDBLite consensus disorder prediction 362 376 - -
Accr2g02175 477 PANTHER IQ-DOMAIN 5-RELATED 1 457 - -
Accr2g02175 477 SMART iq_5 114 136 IPR000048 GO:0005515
Accr2g02175 477 MobiDBLite consensus disorder prediction 319 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02175 Accr-Chr2 56690653 56692610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02175 1 477 IQD Protein Family AT5G03040 49.495 2.22e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02175 - - gmx:100800080 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02175 2 56690653 56692610 Accr5g02320 5 49491287 49493709 CCT
Accr2g02175 2 56690653 56692610 Accr2g02175 2 56690653 56692610 ECH