Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02166 ATGGCCGAAGGTCCGGGTAGTCCCGGCGCGGGTGGTAGCTACGAGGAGAACGGTGATCAGAGCCCTCGCTCTAATGTCCGAGAGCAAGACAGGTACCTGCCCATCGCCAATATCAGCCGAATCATGAAGAAGGGACTTCCTCCCAATGGAAAAATCGCCAAGGAAGCCAAGGAAACCGTGCAGGAATGCGTTTCCGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGGGAAAAGAGGAAGACGATTAACGGCGATGATTTACTTTGGGCAATGGCAACTTTAGGGTTCGAGGAGTACATCGATCCCCTGAAGATTTATCTGGCCAGATACAGGGAGATGGAGGGTGATACTAAGGTTTCGGCCAAGGGCGGAGAAGTAGCTGCTAAGCAAGATGTTCAACCAAGTCCCAATGCTCAGCTCGCTCATCAAGGTTCTTTCTCACAAGGTGTTAACTATACAAATTCTCAGGTTCAACATATGATGGTCCCTATGCAAGGCCCGGAATAG 522 0.5057 MAEGPGSPGAGGSYEENGDQSPRSNVREQDRYLPIANISRIMKKGLPPNGKIAKEAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKIYLARYREMEGDTKVSAKGGEVAAKQDVQPSPNAQLAHQGSFSQGVNYTNSQVQHMMVPMQGPE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02166 173 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 17 150 IPR027113 GO:0001228|GO:0006355|GO:0016602
Accr2g02166 173 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Accr2g02166 173 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Accr2g02166 173 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Accr2g02166 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 96 IPR003958 -
Accr2g02166 173 SUPERFAMILY Histone-fold 29 126 IPR009072 GO:0046982
Accr2g02166 173 FunFam Nuclear transcription factor Y subunit B-3 21 145 - -
Accr2g02166 173 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
Accr2g02166 173 Gene3D Histone, subunit A 19 155 IPR009072 GO:0046982
Accr2g02166 173 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02166 Accr-Chr2 56594769 56597129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02166 7 173 CCAAT-HAP3 Transcription Factor Family AT2G37060 75.000 4.47e-87 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr2g02166 CBFD_NFYB_HMF 4.9e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02166 K08065 - qsu:112028336 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02166 2 56594769 56597129 Accr2g02166 2 56594769 56597129 ECH