Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02160 ATGGCCGCCACAGCTCGCCCACTCGTCACTGTCCAATCTCTCGAGGGTGACATGGCCACTGATGCTGCCCCAACTGTTCATCTTCCTGATGTCATGAAGGCTGCCATCCGTCCCGACATCGTCAACTTCGTCCACGCTCATGTTTCTAAGAATAGTCGCCAACCCTACGCCGTCAGCAAGCGTGCCGGTCACCAGACGTCTGCCGAATCATGGGGTACAGGCCGTGCTGTGTCTCGTATCCCCCGTGTCTCTGGCGGCGGTACCCATCGTGCTGGTCAGGGTGCTTTTGGTAATATGTGTCGTGGTGGTCGTATGTTCGCTCCTACCAAGATTTGGCGCCGATGGCACCGTAAGATCAATGTCAATCAGAAGCGTTACGCTGTCGTTTCAGCCGTTGCTGCCTCGGCAATCCCATCCATTGTAATGGCTCGTGGCCACAGAATTGAGTCTGTGCCGGAAATGCCTCTTGTCGTCAGCGATTCAGCTGAGGGTGTTGAGAAGACTAAGGATGCTATCAAGGTGCTGAAGCAGGTTGGCGCTTTTCCTGATGCTGAGAAAGCAAAGGACAGCCATTCAATCCGAGCTGGTAAGGGTAAAATGAGAAATCGCCGATACATCTCTCGCAAGGGTCCTTTAATTGTGTATGGAACTGAAGGAGCCAAAGCTGTGAAAGCTTTTAGAAACATTCCAGGGGTCGAGGTTGCTAATGTCGAGAGGCTGAACCTTCTGAAGTTAGCTCCTGGTGGTCATCTGGGTAGGTTTGTTATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCAATTTATGGGTCATTCGATAAGCCTTCAGAGAAGAAGAAAGGTTACATTCTTCCAAGGGCCAAGATGGTTAACAGTGACTTGGCTAGGATTATCAACTCTGATGAGATTCAATCCGTGGTGAGACCCATCAAGAGGGAAATTAAGAGGGCACCGCTCAAGAAGAACGCGCTTAAGAACCAGAATACTATGTTTAAACTGAACCCATATTATAAGACTGCCAAGAGAAATGCTCTTCTTGCTGAGGCTCAACGGGTTAAAGCAAAGAAAGAGAAACTTGATAAGAAGAGGAGTTCTCTCTCTAAGGAGGAGGCTTCTGCTATTAAGGCTGCAGGAAAAGCGTGGTATCAAACCATGGTTTCAGACTCCAATTATGCAGAATTTGAGAACTTTTCGAAGTGGTTGGGTGTTTCACAGTGA 1218 0.4885 MAATARPLVTVQSLEGDMATDAAPTVHLPDVMKAAIRPDIVNFVHAHVSKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVSGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAVAASAIPSIVMARGHRIESVPEMPLVVSDSAEGVEKTKDAIKVLKQVGAFPDAEKAKDSHSIRAGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYILPRAKMVNSDLARIINSDEIQSVVRPIKREIKRAPLKKNALKNQNTMFKLNPYYKTAKRNALLAEAQRVKAKKEKLDKKRSSLSKEEASAIKAAGKAWYQTMVSDSNYAEFENFSKWLGVSQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02160 405 ProSitePatterns Ribosomal protein L1e signature. 120 146 IPR013000 -
Accr2g02160 405 PANTHER 60S RIBOSOMAL PROTEIN L4 5 398 IPR045240 -
Accr2g02160 405 Gene3D - 3 308 IPR023574 GO:0003735|GO:0005840|GO:0006412
Accr2g02160 405 Pfam Ribosomal protein L4/L1 family 27 266 IPR002136 GO:0003735|GO:0005840|GO:0006412
Accr2g02160 405 SUPERFAMILY Ribosomal protein L4 10 267 IPR023574 GO:0003735|GO:0005840|GO:0006412
Accr2g02160 405 FunFam 60S ribosomal protein L4 3 308 - -
Accr2g02160 405 Coils Coil 337 369 - -
Accr2g02160 405 MobiDBLite consensus disorder prediction 54 73 - -
Accr2g02160 405 MobiDBLite consensus disorder prediction 54 74 - -
Accr2g02160 405 Pfam 60S ribosomal protein L4 C-terminal domain 280 352 IPR025755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02160 Accr-Chr2 56548609 56550431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02160 2 405 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 80.693 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02160 K02930 - gmx:100779764 719.153