Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02154 ATGGGTTGGATTCCCTGTTCTGGAAATTCAAACACTAAGAAGAAGACAAAGAAGCCAACGAAGAAGATGGAGGTGCAGGAGAACATGGTTGATCCAATGAAACCGGCCCCAGGGAAATTGAAGAGGAATTCATCTACAAATTCCAAGGATGCCTCTAAAACGGGGAACCCTGACCATATAGCAGCACAGACTTTCACATTTCGCGAGTTGGCGACTGCAACTAGAAATTTTAGAACTGAATGCTTGTTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTAATGATCAGGTTGTTGCTATTAAGCAACTTGACCGAAATGGGCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTGTTGATGTTAAGTCTACTACACCACCCTAACCTTGTCAGCCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTTCTCCTGGCAAGAAACATCTTGACTGGAATACAAGAATGAAAATAGCAGCTGGGGCAGCAAAAGGGTTGGAATATCTGCATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTGAAGTGCTCAAACATCTTGCTTGATGAAGGGTACCATCCAAAGTTATCTGATTTTGGCTTGGCCAAACTTGGACCAGTAGGCGATAACACTCATGTGTCAACAAGGGTTATGGGCACCTACGGTTATTGTGCTCCGGAGTATGCAATGACAGGACAGCTGACTCTGAAATCAGATGTCTATAGCTTTGGTGTTGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAACTCCAAGGCTGCTGGAGAACAGAATCTTGTTGCATGGGCGAGACCTTTGTTTAAAGAACGACGAAAATTTTCACAAATGGCGGATCCGATGCTCCAAGGTCAGTATCCTTCAAGAGGCTTATACCAGGCCCTGGCAGTTGCTGCAATGTGTGTTCAGGAGCAGGCTAACATGCGTCCAGTTATAGCTGATGTAGTCACAGCTTTGACTTACCTTGCTTCACAAAGATATGACCCGAATTCAGAGTCACCACAAAGCTCTCGCCATTTGCCTGCGACTCCGAGAGCCAAGAGGGGGCAGTGA 1149 0.4465 MGWIPCSGNSNTKKKTKKPTKKMEVQENMVDPMKPAPGKLKRNSSTNSKDASKTGNPDHIAAQTFTFRELATATRNFRTECLLGEGGFGRVYKGRLESNDQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDVSPGKKHLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLDEGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKERRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALTYLASQRYDPNSESPQSSRHLPATPRAKRGQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02154 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Accr2g02154 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02154 382 Pfam Protein tyrosine and serine/threonine kinase 81 349 IPR001245 GO:0004672|GO:0006468
Accr2g02154 382 MobiDBLite consensus disorder prediction 1 58 - -
Accr2g02154 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Accr2g02154 382 Gene3D Phosphorylase Kinase; domain 1 47 153 - -
Accr2g02154 382 MobiDBLite consensus disorder prediction 359 382 - -
Accr2g02154 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Accr2g02154 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02154 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Accr2g02154 382 Gene3D Transferase(Phosphotransferase) domain 1 154 372 - -
Accr2g02154 382 SUPERFAMILY Protein kinase-like (PK-like) 63 368 IPR011009 -
Accr2g02154 382 CDD STKc_IRAK 83 352 - -
Accr2g02154 382 MobiDBLite consensus disorder prediction 40 58 - -
Accr2g02154 382 PANTHER OS07G0668900 PROTEIN 19 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02154 Accr-Chr2 56488968 56491740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02154 37 356 Glycoside Hydrolase AT3G07070 69.062 5.51e-167 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr2g02154 PK_Tyr_Ser-Thr 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02154 - - gmx:100499648 681.019