Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02139 ATGGAAGAAACCGGAACCATATTGGCTGCACTCTCCGCCCTCCCTCCTTCTCACCTCTCCGATCTCACCTACTCCATCGCCTCCATCGTCCACCACCACAACCTCCGCCTCGCCTCCGTCCTCTCTTCCCAATCCCTCTTCTCCCTCACCCTCCACTACATCCACTCCCTCTCTCTTCCCCAAAAATCCCTCCTCATTGCCCGCCACCTCCTCTCTTCACTCCACACCCTCACGCGCCACTTCGAGCCGCCGCCGCCTCCTTTATCCACTGTCATGAGACAGCGTGACCTCGACGCCGTTCTTCTCCTCCTCTTATTCTGCGATGCGCACCAGCACCATCCACAAGTTCTCGAAGTTCCAGTTCGCTATTGGCGCAGAAATCTGAGGACGCTCTTCGCCGATAAATTGTTGGGGATTTCTTCTACTCCAATCGGGGAATGCAGCGCCGCGATTTTGATTCCGTATATTGAGATGGTGATACGGTGGTGGAGGCTGGTGGGTTCAATAGGATGCGGCGGAGAAAAGGGAGGTGGGGAAGTGGCGGCGTCGAGGGCGGCGGTGGTGGCGCTGCCGAGAGTGGAGGTGAGGGCGGGGGGAAGAGAGTGCGTGATATGCAAAGAGGAGATGAGGGTGGGGAGGGATGTGTGCGAACTGCCATGTCAGCACGTGTTTCATTGGAATTGCATATTGCCGTGGCTGAGTAAAAGGAATACGTGTCCTTGCTGCCGGTTCCGGCTGCCGTCCGATGATGTGCTTGGAGAGATCCAGCGGCTGTGGGAGGTCTTGGTCAAAACGTGTGGGGCAGAGTAG 810 0.5741 MEETGTILAALSALPPSHLSDLTYSIASIVHHHNLRLASVLSSQSLFSLTLHYIHSLSLPQKSLLIARHLLSSLHTLTRHFEPPPPPLSTVMRQRDLDAVLLLLLFCDAHQHHPQVLEVPVRYWRRNLRTLFADKLLGISSTPIGECSAAILIPYIEMVIRWWRLVGSIGCGGEKGGGEVAASRAAVVALPRVEVRAGGRECVICKEEMRVGRDVCELPCQHVFHWNCILPWLSKRNTCPCCRFRLPSDDVLGEIQRLWEVLVKTCGAE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02139 269 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Accr2g02139 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 249 IPR013083 -
Accr2g02139 269 SMART ring_2 202 242 IPR001841 -
Accr2g02139 269 SUPERFAMILY RING/U-box 198 248 - -
Accr2g02139 269 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 150 247 - -
Accr2g02139 269 CDD RING-H2_PA-TM-RING 201 243 - -
Accr2g02139 269 Pfam Ring finger domain 201 243 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02139 Accr-Chr2 56319975 56320784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02139 2 265 C3H Transcription Factor Family AT5G02750 51.812 1.04e-80 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02139 K11982 - qsa:O6P43_006733 321.627