Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g02125 | ATGAAAAGGGAGAGAGATTGCGAGACCTTGGACTTGGCCAACTCTCTCATGCTGCTTCATCATCATCAACAACAACAAACAAGGGTTGATGGTAATACTGGTTCAGAATTTGAGTGCAAGACGTGCAAGCGTAAGTTCTCATCGTTTCAGGCTCTGGGAGGTCACAGAGCAAGCCACAAGAGGCCCAAGCTGGACGCCCAAGACGACCTCAAAGCAGAGGCCAAATCTCTGAGGTTGGGCAACAAACCCAAGACGCATGAGTGTTCTATTTGTGGGGTTGAGTTCTCGCTCGGCCAAGCACTCGGCGGCCACATGAGAAAGCACAGAGCCGCTCTTCACCAACACACCAACGACCAAGTAGTGGACAATATAGTGGCCAAGGTTCCTGTTCTCAAGAGATCTAACAGCACGAGGGTGTTTTGTTTGGACCTCAACTTGACGCCTCTCCAGAATGAGTTGAACTTGTTTTCAAAGATGGCTCCCGCCTTCACTTGA | 495 | 0.499 | MKRERDCETLDLANSLMLLHHHQQQQTRVDGNTGSEFECKTCKRKFSSFQALGGHRASHKRPKLDAQDDLKAEAKSLRLGNKPKTHECSICGVEFSLGQALGGHMRKHRAALHQHTNDQVVDNIVAKVPVLKRSNSTRVFCLDLNLTPLQNELNLFSKMAPAFT | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g02125 | 164 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 4 | 151 | - | - | |
Accr2g02125 | 164 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 37 | 64 | IPR013087 | - | |
Accr2g02125 | 164 | SMART | c2h2final6 | 86 | 108 | IPR013087 | - | |
Accr2g02125 | 164 | SMART | c2h2final6 | 37 | 59 | IPR013087 | - | |
Accr2g02125 | 164 | SUPERFAMILY | beta-beta-alpha zinc fingers | 37 | 108 | IPR036236 | - | |
Accr2g02125 | 164 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 88 | 108 | IPR013087 | - | |
Accr2g02125 | 164 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 39 | 59 | IPR013087 | - | |
Accr2g02125 | 164 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 86 | 108 | IPR013087 | - | |
Accr2g02125 | 164 | Pfam | C2H2-type zinc finger | 86 | 110 | - | - | |
Accr2g02125 | 164 | Pfam | C2H2-type zinc finger | 37 | 62 | - | - | |
Accr2g02125 | 164 | Gene3D | Classic Zinc Finger | 34 | 108 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g02125 | Accr-Chr2 | 56228088 | 56228582 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g02125 | 1 | 158 | C2H2 Transcription Factor Family | AT2G37430 | 44.444 | 1.55e-38 | 127 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Accr2g02125 | zf-C2H2_6 | 2.4e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g02125 | - | - | pcin:129302030 | 243.817 |