Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02125 ATGAAAAGGGAGAGAGATTGCGAGACCTTGGACTTGGCCAACTCTCTCATGCTGCTTCATCATCATCAACAACAACAAACAAGGGTTGATGGTAATACTGGTTCAGAATTTGAGTGCAAGACGTGCAAGCGTAAGTTCTCATCGTTTCAGGCTCTGGGAGGTCACAGAGCAAGCCACAAGAGGCCCAAGCTGGACGCCCAAGACGACCTCAAAGCAGAGGCCAAATCTCTGAGGTTGGGCAACAAACCCAAGACGCATGAGTGTTCTATTTGTGGGGTTGAGTTCTCGCTCGGCCAAGCACTCGGCGGCCACATGAGAAAGCACAGAGCCGCTCTTCACCAACACACCAACGACCAAGTAGTGGACAATATAGTGGCCAAGGTTCCTGTTCTCAAGAGATCTAACAGCACGAGGGTGTTTTGTTTGGACCTCAACTTGACGCCTCTCCAGAATGAGTTGAACTTGTTTTCAAAGATGGCTCCCGCCTTCACTTGA 495 0.499 MKRERDCETLDLANSLMLLHHHQQQQTRVDGNTGSEFECKTCKRKFSSFQALGGHRASHKRPKLDAQDDLKAEAKSLRLGNKPKTHECSICGVEFSLGQALGGHMRKHRAALHQHTNDQVVDNIVAKVPVLKRSNSTRVFCLDLNLTPLQNELNLFSKMAPAFT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02125 164 PANTHER ZINC FINGER PROTEIN ZAT5 4 151 - -
Accr2g02125 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Accr2g02125 164 SMART c2h2final6 86 108 IPR013087 -
Accr2g02125 164 SMART c2h2final6 37 59 IPR013087 -
Accr2g02125 164 SUPERFAMILY beta-beta-alpha zinc fingers 37 108 IPR036236 -
Accr2g02125 164 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Accr2g02125 164 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Accr2g02125 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
Accr2g02125 164 Pfam C2H2-type zinc finger 86 110 - -
Accr2g02125 164 Pfam C2H2-type zinc finger 37 62 - -
Accr2g02125 164 Gene3D Classic Zinc Finger 34 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02125 Accr-Chr2 56228088 56228582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02125 1 158 C2H2 Transcription Factor Family AT2G37430 44.444 1.55e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g02125 zf-C2H2_6 2.4e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02125 - - pcin:129302030 243.817