Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02124 ATGATGAAAAGGGAGAGAGATTGCGAGACCTTGGACTTGGCCAACTCTCTCATGCTGCTTCATCATCATCAACAACAACAAACAAGGGTTGATGGTAATACTGGTTCAGAATTTGAGTGCAAGACGTGCAAGCGTAAGTTCTCATCGTTTCAGGCTCTGGGAGGTCACAGAGCAAGCCACAAGAGGCCCAAGCTGGACGCCCAAGACGACCTCAAAGCAGAGGCCAAATCTCTGAGGTTGGGCAACAAACCCAAGACGCATGAGTGTTCTATTTGTGGGGTTGAGTTCTCGCTCGGCCAAGCACTCGGCGGCCACATGAGAAAGCACAGAGCCGCTCTTCACCAACACACCAACGACCAAGTAGTGGACAATATAGTGGCCAAGGTTCCTGTTCTCAAGAGATCTAACAGCACGAGGGTGTTTTGTTTGGACCTCAACTTGACGCCTCTCCAGAATGAGTTGAACTTGTTTTCAAAGATGGCTCCCGCCTTCACTTGA 498 0.498 MMKRERDCETLDLANSLMLLHHHQQQQTRVDGNTGSEFECKTCKRKFSSFQALGGHRASHKRPKLDAQDDLKAEAKSLRLGNKPKTHECSICGVEFSLGQALGGHMRKHRAALHQHTNDQVVDNIVAKVPVLKRSNSTRVFCLDLNLTPLQNELNLFSKMAPAFT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02124 165 PANTHER ZINC FINGER PROTEIN ZAT5 5 152 - -
Accr2g02124 165 SUPERFAMILY beta-beta-alpha zinc fingers 38 109 IPR036236 -
Accr2g02124 165 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Accr2g02124 165 Gene3D Classic Zinc Finger 35 109 - -
Accr2g02124 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 109 IPR013087 -
Accr2g02124 165 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Accr2g02124 165 SMART c2h2final6 87 109 IPR013087 -
Accr2g02124 165 SMART c2h2final6 38 60 IPR013087 -
Accr2g02124 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Accr2g02124 165 Pfam C2H2-type zinc finger 38 63 - -
Accr2g02124 165 Pfam C2H2-type zinc finger 87 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02124 Accr-Chr2 56228088 56228585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02124 2 159 C2H2 Transcription Factor Family AT2G37430 44.444 1.47e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g02124 zf-C2H2_6 2.5e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02124 - - pcin:129302030 243.817