Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02109 ATGGCTTTCTTCTCTGGAATCCGCCGCCTTATTCGCGATTCATCTTCTTCCTCTTCTATTCTTTATTCGCAACTTACTTCGATTCGTCTTACTTCAACCCTCACGTCCCCCAGGCTTTTCGTCAGTGGTCTATCAAGACTGACCACAGATGAAAAACTAAAGGAAGCATTTACTCCTTTTGGGCAGCTGGTTGAAGCTAAGGTCATAACTGATAGAATCTCTGGAAGATCAAAGGGATTTGGTTTTGTGACTTATGCGAGTATAGAAGATGCTGAAAAGGCCAAAGAAGGAATGAATGCTAAGTTTTTGGATGGATGGGTTATATTTGTTGATCCTGCCAAACCAAGAGAACCTAAACCTCTGCAATCACAGCCTCAGCCCTCTGAAACAGGTTTTACAGTGAACAAGACGGTTGGATGGTGTGGTTGA 429 0.4312 MAFFSGIRRLIRDSSSSSSILYSQLTSIRLTSTLTSPRLFVSGLSRLTTDEKLKEAFTPFGQLVEAKVITDRISGRSKGFGFVTYASIEDAEKAKEGMNAKFLDGWVIFVDPAKPREPKPLQSQPQPSETGFTVNKTVGWCG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02109 142 Gene3D - 13 125 IPR012677 -
Accr2g02109 142 PANTHER NUCLEOLAR PROTEIN 8 19 141 - -
Accr2g02109 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Accr2g02109 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Accr2g02109 142 SMART rrm1_1 38 111 IPR000504 GO:0003723
Accr2g02109 142 FunFam RNA binding protein 24 136 - -
Accr2g02109 142 SUPERFAMILY RNA-binding domain, RBD 36 127 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02109 Accr-Chr2 56086736 56089477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02109 39 129 Eukaryotic Initiation Factors Gene Family AT3G16380 40.000 2.63e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02109 - - qsa:O6P43_006775 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02109 2 56086736 56089477 Accr2g02109 2 56086736 56089477 ECH