Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02103 ATGGCGGCAGCGAGGCGGCTCCGGGACCTACAAGCCCAACCGGGGAATAAGATCTGTGTTGATTGCGCTCAAAAGAACCCCCAATGGGCTTCCGTTTCCTATGGAGTTTTCATGTGCTTAGAATGCTCCGGCAAGCACCGTGGCCTCGGTGTCCACATCTCCTTTGTCCGATCCGTTACGATGGATTCCTGGTCCGAAATTCAGATCAAGAAGATGGAAGCAGGTGGTAATGAGAAACTCAATGCCTTCCTTGCCCAGTATGGTATCGCCAAGGAGACCGATATTGTGGCCAAGTACAATACTAATGCGGCTAGCATTTATAGGGATCGAATTCAGGCCATTGCCGAGGGACGACCGTGGCGGGATCCACCGGTTGTTAAGGAGAACCTTGGCTCTGGGAAGAGTAAACCTCCGTTGCCCAAAAGTGGAAACGATGGGGGCTGGGATAGCTGGGATAACGATGACGGGGTTAGATCTCCTCATGATTTCAAGCGCAACATGTCTACGGGCGATGTAAGGGGGTTCAATGGAGGTTCGACCGGTAGCAGGCCCTCGAGATCGAAGTCGACGGAGGATATCTACACGCGGTCGCAATTGGAGGCTTCCGCTGCCAACAAAGACAACTTTTTCGCTCGCAAGATTGCAGAGAACGAATCACGACCCGAAGGGATTGCACCCTCGCAAGGAGGCAAGTACGTTGGATTCGGATCTAGCCCCGCACCTCCGCGGGTGAATAACCAACAAAACGATGTCTTCTCAGTCATGTCTCAGGGATTTGGTAAATTATCTTTGGTTGCTGCCTCTGCGGCTCAGTCTGCTGCTAATGTTGTTCAGGCTGGCACTAAAGAGATCACTACCAAGGTAAAGGATGGTGGCTATGATCACAGAGTCAATGAAACTGTCACTGTTGTTTCCCAGAAGACATCAGAGATCGGACAGAAGACGTGGGGGATTATGAAGGGGGTCATGGCTTTGGCTTCGCAGAAGGTTGAGGAGTACACCAGAGATAACCCCAACTGGACAACTGATAATTGGCAGCGAAATGAAAATGAGAGAAATGGCTATTATCAAGAATATAGTCAAGAGAATAAAGGTTGGAATTCTTCTAGTGGAGGAGGACAACCTTCATCAGCTGGGCAGAATAATACTTATAATTCAAACTCATGGGATGATTGGGACAGTAGTGATACTAGGAAGAAAGAACCAGCTAAAGTATCAGCTACTCATGATGATGGTTGGGCTGGCTGGGATGATCATAAAGATGATGAGTTTGATAATTCGCACCAGAGTGTATCAAATAAGAATGCAGTTGGTCAGAATGGGAAGCCAGGTGACAGGTGGACAGGAGGAGGCTTTATGTGA 1362 0.4905 MAAARRLRDLQAQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNEKLNAFLAQYGIAKETDIVAKYNTNAASIYRDRIQAIAEGRPWRDPPVVKENLGSGKSKPPLPKSGNDGGWDSWDNDDGVRSPHDFKRNMSTGDVRGFNGGSTGSRPSRSKSTEDIYTRSQLEASAANKDNFFARKIAENESRPEGIAPSQGGKYVGFGSSPAPPRVNNQQNDVFSVMSQGFGKLSLVAASAAQSAANVVQAGTKEITTKVKDGGYDHRVNETVTVVSQKTSEIGQKTWGIMKGVMALASQKVEEYTRDNPNWTTDNWQRNENERNGYYQEYSQENKGWNSSSGGGQPSSAGQNNTYNSNSWDDWDSSDTRKKEPAKVSATHDDGWAGWDDHKDDEFDNSHQSVSNKNAVGQNGKPGDRWTGGGFM 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02103 453 Gene3D Arf GTPase activating protein 1 125 IPR038508 -
Accr2g02103 453 MobiDBLite consensus disorder prediction 172 192 - -
Accr2g02103 453 MobiDBLite consensus disorder prediction 151 168 - -
Accr2g02103 453 Pfam Putative GTPase activating protein for Arf 5 94 IPR001164 GO:0005096
Accr2g02103 453 SUPERFAMILY ArfGap/RecO-like zinc finger 5 108 IPR037278 -
Accr2g02103 453 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 452 IPR044519 GO:0005096|GO:0016192
Accr2g02103 453 MobiDBLite consensus disorder prediction 392 428 - -
Accr2g02103 453 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Accr2g02103 453 MobiDBLite consensus disorder prediction 362 453 - -
Accr2g02103 453 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Accr2g02103 453 MobiDBLite consensus disorder prediction 362 391 - -
Accr2g02103 453 MobiDBLite consensus disorder prediction 118 192 - -
Accr2g02103 453 CDD ArfGap_ArfGap1 3 117 - -
Accr2g02103 453 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Accr2g02103 453 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Accr2g02103 453 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Accr2g02103 453 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02103 Accr-Chr2 56045883 56050274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02103 5 87 C2H2 Transcription Factor Family AT4G05330 50.000 5.44e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02103 K12492 - qsa:O6P43_010403 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02103 2 56045883 56050274 Accr2g02103 2 56045883 56050274 ECH