Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02094 ATGAATCACTGTGTTCCAGATTTCGAATTTGAGATGGATGATGATGAATATCCCATGCCCACCGCTTCTGGGTTGCCCCGCCAAAAGAAGCCCTCCCTCCCCGAAGACGATATCATGGAGCTCTTGTGGCAAAACGGCCAGGTCGTGATGCAGAGCCAGAATCAACGGCCTCAGAGAAAACCGCCGCCAGACAGGTACACTGACAGCGTGATTCCCGCCGGCTCATCCACCGCGAGGGAGATTCGACCCTCGCAACAATTAGAACAACACTATCAAAATCAACATATCTTCATGCAAGAAGATGAAATGATTTCCTGGCTTCACTATCCCATCGTAGATGATCCTCCCTTGGATCATAATTTCTGCGCCGACATCCTCTACCCGCAGTCGCCCACTGTCAATAACAGTTCCATGCAAAATCCCGACCGTGCGCGTCAAGCTACGCAACTCCGGCAGCCATCGCGGTCGGTCGCTCCACGGCCGCCGATTCCACCTCCGCGGAAGCCGGAGCAGGTGCAGACGATGATACCGAACTTCGCGCACTTCTCGAAACACAATGCAAGAGTTGAAGCAGGACCGTCAAGTTCGAAGGCGGCGATGAAGGAATCGACGGTGGTAGATTCATGCGACACTCCGGCCTTGATGGCGTCGGCTTCCAGAGTCTCGGAGACTTTCAGAAACACGGCGGAGCGCGATGAGGCTCCTGGAACGCTGAGCACTGCCGGCGCTGCGGCGCCTTCGTCAACGTCCGTCGGCGGAGATACTGGGTTCAGGGAGACGACGACGTGCGAGATGATGGCGATGTCATCGCCGGAAGGTTCAAGCGGGGGTGTTGAACCGGCAAGGAGACCACCGTCTGAAGATCGGAAACGGAAGGGCCGGGAAGCCGATGAATCGGAGTGCCACAGCGAGGATGTCTACGTTGAATCTGCTGAAGTCAAGAAACAAAATTGTGGATCATCATCTACTAAAAGATCACGTGCTGCAGAGGTTCATAATCTCTCAGAGAGGAGGCGTCGAGATAGGATTAATGAAAAGATGAGAGCCTTGCAAGAACTGATCCCTCGCTGCAATAAGTCCGACAAAGCTTCAATGCTGGATGAAGCAATTGAATACTTGAAGTCACTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGGATGGTACCGATGATGTTTCCCGGAATCCAACAGTATATGCCGACAATGGGGATGGGGATGGGTATGGGCATGGAAATGGGAATGAATAGGCCATTAATGCCATTTCCCAATATGTTAGCTGCTTCTGCTATGCCGGCGGCAGCGGCGGTGGCTCAGTTGGGACCAAGGTTCCCTATGCCCCCTTTCCAAATGCCTCATGCCCCTCAGCCTGATTCATCCAGAATGCAAGCAGCAGCTCCTAATCAACCGGAAAATAATACGCTTCCTTCTCTTGTCACACCTGATCCTAATCAGTCACGGATCCCAAACTTTAATGATCCTTATCAACAATGCCTTGGTCCCCACCACCAGATGCATCTACAGTTCATGCAGAACCAGGTAACAAACAACCCGACTGTCAGCAAATCAAATACCAGTAAGAGCCATGAAAATGCAGAAAATAATCAACCAGGTCAACCAGAGTAA 1629 0.5193 MNHCVPDFEFEMDDDEYPMPTASGLPRQKKPSLPEDDIMELLWQNGQVVMQSQNQRPQRKPPPDRYTDSVIPAGSSTAREIRPSQQLEQHYQNQHIFMQEDEMISWLHYPIVDDPPLDHNFCADILYPQSPTVNNSSMQNPDRARQATQLRQPSRSVAPRPPIPPPRKPEQVQTMIPNFAHFSKHNARVEAGPSSSKAAMKESTVVDSCDTPALMASASRVSETFRNTAERDEAPGTLSTAGAAAPSSTSVGGDTGFRETTTCEMMAMSSPEGSSGGVEPARRPPSEDRKRKGREADESECHSEDVYVESAEVKKQNCGSSSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPTMGMGMGMGMEMGMNRPLMPFPNMLAASAMPAAAAVAQLGPRFPMPPFQMPHAPQPDSSRMQAAAPNQPENNTLPSLVTPDPNQSRIPNFNDPYQQCLGPHHQMHLQFMQNQVTNNPTVSKSNTSKSHENAENNQPGQPE 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02094 542 SMART finulus 333 382 IPR011598 GO:0046983
Accr2g02094 542 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 327 376 IPR011598 GO:0046983
Accr2g02094 542 MobiDBLite consensus disorder prediction 241 269 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 513 542 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 1 32 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 157 171 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 282 311 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 132 155 - -
Accr2g02094 542 Pfam Helix-loop-helix DNA-binding domain 331 377 IPR011598 GO:0046983
Accr2g02094 542 PANTHER TRANSCRIPTION FACTOR PIF3 27 480 IPR044273 GO:0003700|GO:0006355
Accr2g02094 542 MobiDBLite consensus disorder prediction 50 69 - -
Accr2g02094 542 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 325 393 IPR036638 GO:0046983
Accr2g02094 542 Gene3D - 322 385 IPR036638 GO:0046983
Accr2g02094 542 MobiDBLite consensus disorder prediction 462 491 - -
Accr2g02094 542 FunFam Basic helix-loop-helix transcription factor 322 385 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 220 337 - -
Accr2g02094 542 CDD bHLH_AtPIF_like 327 390 IPR047265 -
Accr2g02094 542 MobiDBLite consensus disorder prediction 314 328 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 132 171 - -
Accr2g02094 542 MobiDBLite consensus disorder prediction 447 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02094 Accr-Chr2 55970238 55974044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02094 1 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 42.386 2.36e-71 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr2g02094 HLH 2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02094 - - pcin:129287665 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02094 2 55970238 55974044 Accr2g02094 2 55970238 55974044 ECH