Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02066 ATGGAGGACGAGGCTGATATATACGATGGTGTTAGAGCTCAGTTCCCTCTTAGTTTTGGAAAGCAGTCCAAGTCGCAAACCTCTCTTGAAGTCATCCACAATGCCACCCGTCGTTCCAGTTCCAATCTCAGCTCTAATCCCTCTTCTTCTTCGAATCCCTCTGCCACAACCACCGGCATCAAAAGTACCAATGAACTCCCTCCTATGTCCTCCTCTTCCAAGGCTTGGCTTCGTTCCCTCCGCGACTCCAAAAACCCTAACCATGACGCTACTGCGGATCGTGGTGGTGGTGCTTCCACCATTGGGCCGCCTCGGCCACCTCTACCAGTGGAATCTGATGAGGACGGCGGTGTTATGGTGGGACCGCCTCGGCCGCCGGTGGAAGAAGATGATGATGGTGCGATGATTGGGCCTCCTCCACCGCCTCCCGGTGAAGAAGGGGATGACGATGGGGAGATGATTGGCCCGCCAAGACCTTCCCATTTGGGTGCGTCAAGTGCTGAGGATGATTCAGATGAAGACGAGGTGGGGAATCGCTTTTGTATTCCCCTTAGCAACGAGATTGTTCTCAAGGGCCACACTAAGGTTGTGTCGGCTCTTGCTGTGGATCATACTGGGTCTAGAGTACTTTCTGGAAGTTATGACTATACGGTGCGTATGTATGACTTTCAAGGAATGAATTCGCGGTTGCAATCATTTCGACAATTGGAGCCATTTGAAGGTCATCAAGTTCGCAACCTAAGCTGGAGTCCAAGTGCTGATCGCTTTCTGTGTGTGACAGGATCAGCTCAAGCAAAGATCTATGACCGAGATGGGCTAACTTTGGGAGAGTTTGTAAAGGGGGACATGTATATCCGTGATCTAAAAAATACTAAAGGCCACATAACTGGATTGACATGCGGAGAATGGCACCCAAAAACCAAGGAAACAATTTTAACATCATCAGAGGATGGATCGCTTCGTATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTTATCAAACCAAAGCTTGCAAGACCAGGAAGAGTTCCTGTCACCACATGTGCATGGGATCGTGAAGGCAAATGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGCTTTGGAGTATTAAGCCTGGATGGGGAAGTAGGCCAGATGTATATATTGACAAAGGGCATTCTGAAGATATTACTGGTCTGAAATTTTCTAGTGATGGGAGAATTTTACTGTCAAGAAGCTTTGATGGTTCATTGAAGGTCTGGGATTTGCGCAAAATAAAGGAACCTCTGAAGGCATTTGAAGATCTTCCGAATAATTATGGGCAAACAAATATTGCTTTTAGCCCTGATGAACAACTTTTTTTAACTGGAACATCCTTTGAAAGGGAGAGTTCAAGTGGAGGTTTATTGTGCTTTTATGATCGGACAAACCTTGAGCTTGTTTCAAGAGTTGGTATATCGCCCACTTGTAGTGTTGTGCAATGTGCTTGGCATCCTAAACTGAATCAGATCTTTGCAACGGTTGGTGACAAAAGCCAAGGAGGAACTCACATACTATATGATCCAACCCTGAGTGAGAAAGGAGCTCTTGTTTGCGTTGCACGTGCACCAAGGAAAAAATCCATTGATGATTTTGAGGCAAAACCAGTCGTTCACAATCCTCATGCCTTGCCACTGTTTAGAGATCAGCCAAGCCGTAAACGCCAGCGAGAGAAAATACTAAAGGATCCAATGAAGTCCCATAAGCCTGAGCTTCCCATAACAGGGCCTGGTTTTGGTGGGCGAGTTGGTGTAAGTCAAGGAAGCCTGCTGACTCAATATCTTATGAAGCAAGGGGGTATGATTAAGGAGACATGGATGGAGGAAGATCCGAGAGAAGCTATCCTGAAATTTGCTGATGTTGCAGCAAAAGATCCAAAATTCATTGCTCCCGCATATGCACAAACCCAACCTGAGCCTGTTTTTCAAACTTCAGATTCTGATGAGGAAGAGAAACAATAG 1989 0.4625 MEDEADIYDGVRAQFPLSFGKQSKSQTSLEVIHNATRRSSSNLSSNPSSSSNPSATTTGIKSTNELPPMSSSSKAWLRSLRDSKNPNHDATADRGGGASTIGPPRPPLPVESDEDGGVMVGPPRPPVEEDDDGAMIGPPPPPPGEEGDDDGEMIGPPRPSHLGASSAEDDSDEDEVGNRFCIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKCIAGGIGDGSIQLWSIKPGWGSRPDVYIDKGHSEDITGLKFSSDGRILLSRSFDGSLKVWDLRKIKEPLKAFEDLPNNYGQTNIAFSPDEQLFLTGTSFERESSSGGLLCFYDRTNLELVSRVGISPTCSVVQCAWHPKLNQIFATVGDKSQGGTHILYDPTLSEKGALVCVARAPRKKSIDDFEAKPVVHNPHALPLFRDQPSRKRQREKILKDPMKSHKPELPITGPGFGGRVGVSQGSLLTQYLMKQGGMIKETWMEEDPREAILKFADVAAKDPKFIAPAYAQTQPEPVFQTSDSDEEEKQ 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02066 662 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 130 661 - -
Accr2g02066 662 Gene3D - 158 279 IPR015943 GO:0005515
Accr2g02066 662 Gene3D - 280 519 IPR015943 GO:0005515
Accr2g02066 662 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 386 420 - -
Accr2g02066 662 FunFam WD repeat-containing protein 70 279 521 - -
Accr2g02066 662 ProSitePatterns Trp-Asp (WD) repeats signature. 311 325 IPR019775 -
Accr2g02066 662 MobiDBLite consensus disorder prediction 18 177 - -
Accr2g02066 662 FunFam Nucleotide binding protein 138 278 - -
Accr2g02066 662 ProSiteProfiles Trp-Asp (WD) repeats profile. 190 231 IPR001680 GO:0005515
Accr2g02066 662 CDD WD40 189 508 - -
Accr2g02066 662 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 333 IPR001680 GO:0005515
Accr2g02066 662 ProSiteProfiles Trp-Asp (WD) repeats profile. 386 420 IPR001680 GO:0005515
Accr2g02066 662 Pfam WD domain, G-beta repeat 387 418 IPR001680 GO:0005515
Accr2g02066 662 Pfam WD domain, G-beta repeat 188 222 IPR001680 GO:0005515
Accr2g02066 662 Pfam WD domain, G-beta repeat 346 372 IPR001680 GO:0005515
Accr2g02066 662 Pfam WD domain, G-beta repeat 289 324 IPR001680 GO:0005515
Accr2g02066 662 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 291 326 - -
Accr2g02066 662 MobiDBLite consensus disorder prediction 641 662 - -
Accr2g02066 662 SUPERFAMILY WD40 repeat-like 178 506 IPR036322 GO:0005515
Accr2g02066 662 MobiDBLite consensus disorder prediction 18 80 - -
Accr2g02066 662 PRINTS G protein beta WD-40 repeat signature 405 419 IPR020472 -
Accr2g02066 662 PRINTS G protein beta WD-40 repeat signature 311 325 IPR020472 -
Accr2g02066 662 PRINTS G protein beta WD-40 repeat signature 359 373 IPR020472 -
Accr2g02066 662 SMART WD40_4 379 418 IPR001680 GO:0005515
Accr2g02066 662 SMART WD40_4 232 269 IPR001680 GO:0005515
Accr2g02066 662 SMART WD40_4 328 372 IPR001680 GO:0005515
Accr2g02066 662 SMART WD40_4 281 324 IPR001680 GO:0005515
Accr2g02066 662 SMART WD40_4 183 222 IPR001680 GO:0005515
Accr2g02066 662 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 190 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02066 Accr-Chr2 55664299 55667696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02066 197 429 U-box Gene Family AT2G33340 22.747 1.94e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02066 K24752 - qsa:O6P43_010442 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02066 2 55664299 55667696 Accr2g02066 2 55664299 55667696 ECH