Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02062 ATGCAACTGAAAATTCTGCTCTTCTTCTGTTACATTTTCTGTTTCTCTTATGGTCTTGCTGCTGTTTTGAATGATGAAGTTTCTGCTCTACTTTTTATAAAAGCAGGTCTTATTGATCCGTTGAATAAGCTGCAAGATTGGAAATTGCAGGACAAGGCACCAAGAAAAGATGCAGCGCATTGTAACTGGGTTGGTGTCTCGTGCAATGCTGCTGGAGCTGTTGAGAAGCTTGATCTATCCCACATGAATCTCAGTGGCAGGGTATCCGATGAGATACAAAAGCTACAAAGTCTCTCTACTCTGAACTTATGCTGCAATGGATTCTCCACAACCTTGCCAAAATCTGTAGCCAACCTCACCACATTGAGAAGTCTTGATGTCAGCCAGAATTTATTCGTTGGTGATTTTCCATTAGGTCTTGGAAAGGCGTCACGACTTATGTTTTTTAATGCATCCGGTAATGATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATGCTTCTTTCTTAGAGACGCTGGATCTCAGAGGCAGCTTCTCCCAAGGGTCTATTCCAAAATCGTTCAGTAGATTGCAGAAGTTGAGGTTCCTTGGTCTTTCTGGAAATAATCTCACTGGAGAAATTCCGGGAGATCTGGGACAGCTCTCCTCACTTGAGTATATGATACTCGGGTACAATTCATTTGAGGGTGGGATTCCCAGAGAGTTTGGAAATCTCACCAATCTCAAGTATCTTGATATGGCAGAAGGCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTTAACACGGTTTTCTTATACAGAAACGATTTCAAAGGCAGAATCCCTCCTTCTTTGGGCAATCTGACTTCGTTGGTGTTGATGGATTTCTCTGATAACATGTTATCAGGAAAAATTCCACCTGAAATTGGTCAACTGAAGCATTTAGAGCTCCTAAATTTCATGAGCAACCTTCTATCTGGTCCTGTGCCTTCTGAAATTGGGGATTTGCCTCAATTGAAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGACCATTGCCAAACCACCTGGGCAAGAGTTCACCATTGCAGTGGCTTGATGTATCATCCAACTCTCTCTCTGGTGTGATTCCAGAAACACTTTGCAGCCAGGGCAATCTCACCAAGCTTATCCTTTTCAGTAATGCCTTCACAGGTCCAATCCCAGTCAACCTATCATCGTGCCCTTCACTTGTTCGTGTTCGAATTCATAACAATTTACTTAATGGGACGATTCCAGTCGGTTTTGGGAAACTTCGGAATCTTGAAAGGTTAGAATTGGCCAATAACAGTCTCACTGGTGAAATTCCAAATGACATTGCTTCTTCCACGTCTCTTTCGTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCTACTGTACTTTCTACTCCAAATCTCCAATCATTCTTGGTCTCCCACAACAATTTGGTGGGTGAAATCCCAGACCAATTTCAGGACTGTCCTTCACTCGGTGTTCTTGATCTGTCATCAAATCATCTCTCTGGAAGCATCCCAGCCAGCGTTGCTTCTTGTCAGAAACTGGTAAACTTGAACCTAAAGAACAACCAATTGATTGGTAAAATCCCGAAGGCACTAACAAATATGCCTTCGTTGGCCATTCTTGATTTTTCCAACAACTCTCTGACTGGTGAAATACCTGATAGCTTCGGTATTTCTCCTGCCCTGGAGGCTCTCAATGTCTCATACAACAGGCTTGAGGGTCCTGTCCCAACAAATGGCATGCTGAGAACCATTAACCCAAGTGATCTTGTGGGTAATGCTGGCCTATGTGGTGGCGTCCTTCCTCCATGTGGCCAAAACTCTGGATATGCATTGGAACATGGAAGCTCACGAGCAAAACACATAATCACAGGATGGGCAATTGGGATATCGTCAGTCTTGGCTATTGGGATTGCCATTTTTGTTGTCAGATCTATATACATAAGGTGGTACTCTCATGGCTTCTGCATTGGAGAAACGATTTATAAGGGTGACAAAAGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAAGCACTGAGATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGCAACTGGTGTTGTTTATATGGCTGAAATATCGCAGTCAAATACAATTGTGGCAGTGAAGAAGTTGTGGAAATCAGGATCTGATACTGAAGTAGGAAATAGTGATAACCTTGTTGGGGAGGTGAATCTCTTGGGTCGGCTAAGACATAGAAATATCGTTAGACTCTTAGGATATCTTTATAATGACGTTGATGTTATGATAGTTTATGAATTTATGTCTAATGGCAACCTTGGAGATGCCTTGCATGGCAAACACGCTGGTAGGTTGCTTGTAGACTGGGCTTCCCGTTATAAGATAGCTCTAGGAGTTGCCCAAGGGCTTGCTTATCTTCATTATGACTGTCATCCGCCGGTCATACACCGAGACATCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGAATAGCAGATTTTGGATTAGCCAAAATGATGATCAGGAAGAACGAAACAGTCTCCATGATTGCTGGGTCCTACGGCTACATTGCCCCAGAATATGGATATTCCTTGAAGGTAGATGAAAAGATTGACACTTATAGCTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGGAAGAGGCCCCTGGATTCTGAGTTTGGAGAATCTGTGGACATTGTTGAGTGGATTAGGAGGAAGATTAGAGACAACAAGCCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACTGCAGGCATGTTGTGGAGGAGATGCTTTTAGTTCTTAGAATAGCACTTCTTTGCACTGCCAAGCTACCCAAAGACAGACCCTCCATGAGAGATGTGATAATGATTCTTGAAGAGGCAAAGCCTCGCAGTAAAAGCGATAGCAACGATAAAAAGCATGAAGCTAATAATAAGATGATGCCAGTTTTTAGCACATCATCACCCATTAGTGGCCTTGTGTAG 3054 0.428 MQLKILLFFCYIFCFSYGLAAVLNDEVSALLFIKAGLIDPLNKLQDWKLQDKAPRKDAAHCNWVGVSCNAAGAVEKLDLSHMNLSGRVSDEIQKLQSLSTLNLCCNGFSTTLPKSVANLTTLRSLDVSQNLFVGDFPLGLGKASRLMFFNASGNDFSGFLPEDLGNASFLETLDLRGSFSQGSIPKSFSRLQKLRFLGLSGNNLTGEIPGDLGQLSSLEYMILGYNSFEGGIPREFGNLTNLKYLDMAEGNLGGEIPAELGNLKLLNTVFLYRNDFKGRIPPSLGNLTSLVLMDFSDNMLSGKIPPEIGQLKHLELLNFMSNLLSGPVPSEIGDLPQLKVLELWNNSLSGPLPNHLGKSSPLQWLDVSSNSLSGVIPETLCSQGNLTKLILFSNAFTGPIPVNLSSCPSLVRVRIHNNLLNGTIPVGFGKLRNLERLELANNSLTGEIPNDIASSTSLSFIDFSRNNLHSSLPSTVLSTPNLQSFLVSHNNLVGEIPDQFQDCPSLGVLDLSSNHLSGSIPASVASCQKLVNLNLKNNQLIGKIPKALTNMPSLAILDFSNNSLTGEIPDSFGISPALEALNVSYNRLEGPVPTNGMLRTINPSDLVGNAGLCGGVLPPCGQNSGYALEHGSSRAKHIITGWAIGISSVLAIGIAIFVVRSIYIRWYSHGFCIGETIYKGDKRWPWRLMAFQRLNFTSTEILACIKETNVIGMGATGVVYMAEISQSNTIVAVKKLWKSGSDTEVGNSDNLVGEVNLLGRLRHRNIVRLLGYLYNDVDVMIVYEFMSNGNLGDALHGKHAGRLLVDWASRYKIALGVAQGLAYLHYDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDTYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRIALLCTAKLPKDRPSMRDVIMILEEAKPRSKSDSNDKKHEANNKMMPVFSTSSPISGLV 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02062 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Accr2g02062 1017 MobiDBLite consensus disorder prediction 985 1001 - -
Accr2g02062 1017 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Accr2g02062 1017 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Accr2g02062 1017 Gene3D Transferase(Phosphotransferase) domain 1 790 1009 - -
Accr2g02062 1017 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Accr2g02062 1017 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Accr2g02062 1017 Gene3D Ribonuclease Inhibitor 364 624 IPR032675 -
Accr2g02062 1017 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Accr2g02062 1017 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Accr2g02062 1017 Pfam Protein kinase domain 707 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02062 1017 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 23 178 - -
Accr2g02062 1017 Gene3D Ribonuclease Inhibitor 178 281 IPR032675 -
Accr2g02062 1017 SUPERFAMILY Protein kinase-like (PK-like) 700 982 IPR011009 -
Accr2g02062 1017 MobiDBLite consensus disorder prediction 985 1017 - -
Accr2g02062 1017 SMART serkin_6 705 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02062 1017 PANTHER RECEPTOR-LIKE PROTEIN 55 431 985 - -
Accr2g02062 1017 FunFam MDIS1-interacting receptor like kinase 1 705 789 - -
Accr2g02062 1017 Gene3D Ribonuclease Inhibitor 282 363 IPR032675 -
Accr2g02062 1017 SUPERFAMILY RNI-like 272 590 - -
Accr2g02062 1017 SMART LRR_typ_2 551 575 IPR003591 -
Accr2g02062 1017 SMART LRR_typ_2 431 455 IPR003591 -
Accr2g02062 1017 SMART LRR_typ_2 287 311 IPR003591 -
Accr2g02062 1017 SMART LRR_typ_2 95 119 IPR003591 -
Accr2g02062 1017 SMART LRR_typ_2 335 359 IPR003591 -
Accr2g02062 1017 SMART LRR_typ_2 503 527 IPR003591 -
Accr2g02062 1017 SMART LRR_typ_2 191 215 IPR003591 -
Accr2g02062 1017 MobiDBLite consensus disorder prediction 1003 1017 - -
Accr2g02062 1017 Gene3D Ribonuclease Inhibitor 21 177 IPR032675 -
Accr2g02062 1017 SUPERFAMILY L domain-like 60 349 - -
Accr2g02062 1017 FunFam MDIS1-interacting receptor like kinase 1 790 1000 - -
Accr2g02062 1017 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Accr2g02062 1017 Pfam Leucine rich repeat N-terminal domain 24 69 IPR013210 -
Accr2g02062 1017 ProSiteProfiles Protein kinase domain profile. 705 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02062 Accr-Chr2 55614738 55617981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02062 1 1017 Receptor kinase-like Gene Family AT1G08590 57.763 0.0 1148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr2g02062 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02062 - - gmx:100811284 1621.68