Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02061 ATGTCTACGGTATCAAGGGAAGATAATTTGGTTTTGTCTTCGGAGGATTCTTCATGCCCAGACGAATCTGAGCTTGAATTAGGTCTTGGCTTAGGCTTTTCTCGTCGTCCTGGGCTGAAGTCCCAATCACTTTCCACGAATCAATATGCTAGAATTTTAACGGCTAAAGATTTTCCTTCTATGGTTTCTTCTCGTTCTGCAACTTCACTGGCCTCATCAACCTCCTCCTCTTCTTCTCCTTCCTCTGTGACCAGGCCTAACGCCACTGCTGGCATCAAGAGAACTGCCGATTCTGTTGTTGCTGCTAATTGCCTCAGTCAGGTTGTGGGATGGCCTCCCGTTGGAGCATATCGAATGAATAGCTTTAACAATCATGCAAAGTCACCTGCCACTAATGGGTTCAACTCAGTGAATGAGAAAAGTATGGACAATGGTACAGAGGCTAGGAAGAGTACTGATAATGGCATTGATAATAGCAATGTCAGTACCACAGGTAAAGGACACCTGAAGAGTACCTGGTTTGTGAAGGTAAATATGGATGGGTTACCAATTGGAAGGAAGGTTGATTTGAGGGTTCACAATTCCTATGAAAGCTTAGCACTTACTTTGGAGGAGATGTTCGATGACCACACTGTAGCTGTTTCGAGTAGAATTGGATCAAATGGGAAAGAACATGGCAGAGCAGAAAGACGGTCAACATTGCTGGATGGATCTTCCAAGTTTGTACTTACTTATGAAGACAAAGATGGAGACTGGATGCTTGTTGGGGATGTACCTTGGGGGATGTTTCTAAGCTCTGTGAGGAGGCTAAGAATCATGAGAACATCTGAGGCCAATGGACTGGCACCAAAATATGAAGAAAAAAACAGCAGACAGAGAAGTTAG 885 0.4407 MSTVSREDNLVLSSEDSSCPDESELELGLGLGFSRRPGLKSQSLSTNQYARILTAKDFPSMVSSRSATSLASSTSSSSSPSSVTRPNATAGIKRTADSVVAANCLSQVVGWPPVGAYRMNSFNNHAKSPATNGFNSVNEKSMDNGTEARKSTDNGIDNSNVSTTGKGHLKSTWFVKVNMDGLPIGRKVDLRVHNSYESLALTLEEMFDDHTVAVSSRIGSNGKEHGRAERRSTLLDGSSKFVLTYEDKDGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPKYEEKNSRQRS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02061 294 Pfam AUX/IAA family 25 284 IPR033389 -
Accr2g02061 294 FunFam Auxin-responsive protein 167 285 - -
Accr2g02061 294 ProSiteProfiles PB1 domain profile. 172 277 IPR000270 GO:0005515
Accr2g02061 294 MobiDBLite consensus disorder prediction 1 18 - -
Accr2g02061 294 MobiDBLite consensus disorder prediction 1 23 - -
Accr2g02061 294 MobiDBLite consensus disorder prediction 130 163 - -
Accr2g02061 294 SUPERFAMILY CAD & PB1 domains 168 273 - -
Accr2g02061 294 MobiDBLite consensus disorder prediction 70 90 - -
Accr2g02061 294 Gene3D - 168 287 - -
Accr2g02061 294 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 280 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02061 Accr-Chr2 55605263 55608145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02061 176 284 B3 DNA Binding Superfamily AT1G59750 33.945 6.81e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr2g02061 AUX_IAA 4e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02061 K14484 - gmx:100779400 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02061 2 55605263 55608145 Accr5g02428 5 50680482 50683364 CCT
Accr2g02061 2 55605263 55608145 Accr2g02061 2 55605263 55608145 ECH