Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02054 ATGGCACCCAATCCAAGGGTGGTAGCAGCCTATCGCGCAATGACTGTTCTTGGCATCAAGGAAGTACAAGTTAAACCCGTATTGAAGCAACTGCTTAAACTCTATGATAAGAACTGGGAACTTATTGAACAAGAAAACTATAGAGTTCTAGCAGATGCTATATTTGAGCAGGCGGAAAAAGAGTTGCAGGGAAAGAGGCAAAAAAACCAGAACAATGATGAAGGAGAAATGGAGGATGAAGAAGCTCAAATGCAAGATGAATCAGTACGGCCTTTTAAGAGGTTGCGTTTAAGAGGCCAAGAGAATCAGCTGAGTATTGGTGGAACCAGCTCAGCTGCCTCCCCATCTAAAATGCCCAAAGTAGAAGATGATGAATTGCCCCAGCAGCCTCAATACAAGGCAATGTCGCCTCAGTCCAATAGAAATGCTGAGACTGAAGTTTGTCCCGTTCCAGTGCAAGACAGTCTAGTTGACAAGGGAAAGCAACCTTTATCATCTCAAGATGCGCCTGGAGGAAGAAGAGTTGGATCTGAAAGAGCATCTCCATCAGTGCAACTTAAAGAACCTACAACTGAACAGAGAATTGTGGTGTCACAGAAAAACCAGTTGCCCTATACTCACGAGTTGATCATACCTAAAGATGAGCCTATTGATGAACTGGTACATTATGATGCTCCTATGGCAACAAGAAATCCTGAACTGCCTAGGGGAAGAGACCCTCCAATGCAGCATGATGCAACTAGAAAACAAGGCAGGAATGGTCCTTTAATGTCAAAACGCAGAGATGTAGGTAGAGGGGAAGGTATTCGGGATTCATCAAATGAAGCGAACCATGAGGTTGCGACAAACCAAGAATGTTCTACCATAGAGATAGCCTCCTCAAAATCTAAATCTGGAGAGGTAACACTTACTATGAGTTGCAGTTCAGCTATTGGGAGATCAGATTTTCGTTTGCCTAGTCGAGATCAACTTTTAAAAATGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAGTTTTTCTATCATGAAACTGTTGAGAGATTTGTGTGATTGCGTGTTGGAATTCAGAACTGATTCAAATGATGACTCACAGGAAGGATCTGAAATGACGACATCAAGTATAAATGTATTGAAGGAATCTAAGACATGTGATGCTCTAGTTATCAGAGGCAATACAGAAGATTTAGAAATGCATGCTGGCTTGTCAAATGGATCAATCAACGTTCAGTCTTCTTCTGCATTGGCTGCATCTCACATTTCCATTTCTCCCCCACTCACGACTGGTATGAATGATGCTGTACTAGTCACCAATAAGGCCAGAAGTGCTTTTCCAGAATGTGAAGATGGAAAGGGGCTGGAGGATCCTATGCATCCTCATTCAGGTAGTTTGGTGGTTGTTCAACAGCATCAGCTAACTCCTGATGATCTAAGGTCTCTCCATGGTGCTGATGACCTTTCAAAAGGAGAAGAAAATCTCAGAATTCCATGGGTGAATGAACTAACAAATGATTTCCCTCCACCTTTTCACTATCTGCACCAGAGCATTGCTTTCAGAGATGCTTATGTTAACTGGTGTCTTTCAAAGATCAAGTGTGAGGATTTTTGTTCGACTTGTTTGGGTGATTGTCTTCTGTCCCCCACTCCTTGTGTTTGTGCAAATAAAATTGAGGGTGGGTATGCATACACATCTGAAGGGCTACTGAAAGAAAGTTTATTGGAAGAGTGTATTACCATTAGCCACAACCCTCAACGACATCAGTTCTACTGTAAAATCTGCCCCCTTGAAAGAGCAAAGAATGATGATTGTTTAGAACCATGTAAAGGGCACTTGAAGAGAAAGTTTATCAAAGAATGTTGGGTAAAGTGTGGCTGTGTGAAACAGTGTGGCAATAGGGTTGTCCAACGAGGAATCACATTCAATTTGCAGGTATTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGTACCTTAGAGGAGCTGCCAAAAGGTGCATTTGTGTGTGAGTTTGTGGGAGAAATATTAACCGTCAAGGAGTTGCATGAGAGGAACATTCAGTGTGCCCAAAATGGAACGTACACATACCCAGTTCTATTAGATGCAGATTGGGATTCAGGAGATATAAATGATAAAGAAGCTCTTTGCTTGGACGCAGCATCTTATGGGAATGTTGCTAGGTTTATAAATCACAGATGTTTGGATGCGAACTTGATTGAGATCCCAGTAGAAGTTGAAACCTCAGATCATCACTATTTTCATCTTGCTTTCTTCACATCCAGAAAAGTAGCTGCTTTGGAAGAGCTAACTTGGGATTATGGTATTGACTTTGACGACAGTGAGAGTCCTGTTAAGCCATTCTCTTGCAGATGTGGCAGCAAGTTCTGCAGGAAGATGGAGCGTTCAAATAGATCCAATAGATCTGCTCTTACCGCTTGA 2445 0.4196 MAPNPRVVAAYRAMTVLGIKEVQVKPVLKQLLKLYDKNWELIEQENYRVLADAIFEQAEKELQGKRQKNQNNDEGEMEDEEAQMQDESVRPFKRLRLRGQENQLSIGGTSSAASPSKMPKVEDDELPQQPQYKAMSPQSNRNAETEVCPVPVQDSLVDKGKQPLSSQDAPGGRRVGSERASPSVQLKEPTTEQRIVVSQKNQLPYTHELIIPKDEPIDELVHYDAPMATRNPELPRGRDPPMQHDATRKQGRNGPLMSKRRDVGRGEGIRDSSNEANHEVATNQECSTIEIASSKSKSGEVTLTMSCSSAIGRSDFRLPSRDQLLKMMEDKCLQSYNITDPSFSIMKLLRDLCDCVLEFRTDSNDDSQEGSEMTTSSINVLKESKTCDALVIRGNTEDLEMHAGLSNGSINVQSSSALAASHISISPPLTTGMNDAVLVTNKARSAFPECEDGKGLEDPMHPHSGSLVVVQQHQLTPDDLRSLHGADDLSKGEENLRIPWVNELTNDFPPPFHYLHQSIAFRDAYVNWCLSKIKCEDFCSTCLGDCLLSPTPCVCANKIEGGYAYTSEGLLKESLLEECITISHNPQRHQFYCKICPLERAKNDDCLEPCKGHLKRKFIKECWVKCGCVKQCGNRVVQRGITFNLQVFFTSEGKGWGLRTLEELPKGAFVCEFVGEILTVKELHERNIQCAQNGTYTYPVLLDADWDSGDINDKEALCLDAASYGNVARFINHRCLDANLIEIPVEVETSDHHYFHLAFFTSRKVAALEELTWDYGIDFDDSESPVKPFSCRCGSKFCRKMERSNRSNRSALTA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02054 814 SMART set_7 643 782 IPR001214 GO:0005515
Accr2g02054 814 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 812 IPR025776 -
Accr2g02054 814 Pfam SET domain 655 776 IPR001214 GO:0005515
Accr2g02054 814 SUPERFAMILY SET domain 495 800 IPR046341 -
Accr2g02054 814 Gene3D SET domain 489 801 IPR046341 -
Accr2g02054 814 Gene3D - 1 60 IPR043017 -
Accr2g02054 814 CDD SET_SETDB-like 510 776 - -
Accr2g02054 814 Pfam Pre-SET motif 490 635 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr2g02054 814 MobiDBLite consensus disorder prediction 102 116 - -
Accr2g02054 814 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 810 - -
Accr2g02054 814 MobiDBLite consensus disorder prediction 154 192 - -
Accr2g02054 814 MobiDBLite consensus disorder prediction 100 126 - -
Accr2g02054 814 SMART preset_2 486 627 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr2g02054 814 MobiDBLite consensus disorder prediction 61 88 - -
Accr2g02054 814 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Accr2g02054 814 ProSiteProfiles SET domain profile. 643 776 IPR001214 GO:0005515
Accr2g02054 814 MobiDBLite consensus disorder prediction 229 281 - -
Accr2g02054 814 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02054 Accr-Chr2 55490883 55495543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02054 619 801 C2H2 Transcription Factor Family AT2G23740 40.000 7.00e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr2g02054 Pre-SET 8.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02054 - - vun:114190802 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02054 2 55490883 55495543 Accr2g02054 2 55490883 55495543 ECH