Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02049 ATGGAAGCACGCCCTGCCTTTTCCATTGAAAGATCAGGTGCAAAGCAACTTAGTAGCATGGGAATGTCTGGAGCACTGTCTTCATCCCTGCCTGTCCACCCAACACCCATAGAAGAGACATATTCCAAGATACCAGATTCTCAGCAGGCTTTTGTGGAAAAAGAGCGCTTGGCAAGACCTCTCACTCATTCAAGTCATTTAAATTCCAGCGGAGCAGTTGGGCACATGTTTTCATCATCCCCTGGATATTCTACTGATCTCCATCATTCATCCCTTTCACCTCATGGAAAACACTCAAGAAATCCACATTTTATTTCTCAGTCTTCAAGTAACATGGTATCATTGCCATTGTCATATTCTTCAAGTAGTGGACCACTGCCTTCTACTACATCAAGTTGTTATTCCAAAGAAAGTAACGGATCCTGGGATGCTGATTCCATGCCAAACATTCTTGATTTTCCTGTAAATACTTCCATTAAGGATAGTCAAGTAGAAAGCAGTGCCTGCAATATAATGGCACCTGACGAGGATGGTAAGAAAAATGATTGGCAGGAGTGGGCTGACCAACTGATCAATGATGATGATGCGTTGACTTCTAACTGGAATGACATTCTTGTTGACCCCAGCATTCATGATCTTGAACCAAAGGTGTCATGCCAGACTTCAAAGTCATCTTTGCCAGGCCAGCAGCCCCAAGGTCATCAGCAACTTTCAGCTTCATCGGGAGAAAAACATGGTAGTGCTCCACCCTCTTCCTCAGCAAATTCTGCTCCTGCCAAGCCACGAATGCGTTGGACACCAGAGCTTCATGAGGCCTTTGTGGAGGCTGTAACCAAACTTGGTGGGAGTGAAAGAGCAACCCCTAAGGGGGTGCTGAGGCTTATGAAAGTTGAAAGCTTAACTATATATCACGTGAAAAGCCACTTGCAGAAATATAGGACAGCTAGATATAGACCGGAGTCATCTGAAGGATCCTCTGAGAAAAAGCTAACTCCAATTGAAGAGATGTCATCTCTAGACTTGAAAACCGGTATTGAGCTCACTGAAGCTCTGAGACTGCAGATGGAGGTTCAGAAGCGCCTACATGAACAACTAGAGATTCAAAGGAATTTACAGTTGCGGATTGAAGAACAAGGAAGGTACCTCCAAATGATGTTTGAGCAACAATGCAAATCTGGCGTTGAAAAGTTTAAGGCAGCATCATCAGCCATTGAGGATCCCTCTGGAGTGTCATCAGATGCTATAAAAGATTCTTCTGCCAAAACTGAAGTGGATGTCTCCCAAGTGAACCATTCCAAGTCAGGAACTGAACCGGATAATAATAGCAATGCCCAGGTTGAAGCAAACTCGCTGAAAGTTGTTGAGAATGATAATGCTCCCGAAAGTCAAACTTCTGATAATCCTAAGCAAGGTGCGAGTGAAGACTATGTTAATGCTCCACCATCAAAGCGTCAAAGGACAGACGAATAA 1470 0.4401 MEARPAFSIERSGAKQLSSMGMSGALSSSLPVHPTPIEETYSKIPDSQQAFVEKERLARPLTHSSHLNSSGAVGHMFSSSPGYSTDLHHSSLSPHGKHSRNPHFISQSSSNMVSLPLSYSSSSGPLPSTTSSCYSKESNGSWDADSMPNILDFPVNTSIKDSQVESSACNIMAPDEDGKKNDWQEWADQLINDDDALTSNWNDILVDPSIHDLEPKVSCQTSKSSLPGQQPQGHQQLSASSGEKHGSAPPSSSANSAPAKPRMRWTPELHEAFVEAVTKLGGSERATPKGVLRLMKVESLTIYHVKSHLQKYRTARYRPESSEGSSEKKLTPIEEMSSLDLKTGIELTEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEQQCKSGVEKFKAASSAIEDPSGVSSDAIKDSSAKTEVDVSQVNHSKSGTEPDNNSNAQVEANSLKVVENDNAPESQTSDNPKQGASEDYVNAPPSKRQRTDE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02049 489 MobiDBLite consensus disorder prediction 402 489 - -
Accr2g02049 489 NCBIfam myb-like DNA-binding domain, SHAQKYF class 260 314 IPR006447 GO:0003677
Accr2g02049 489 Gene3D - 259 318 - -
Accr2g02049 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 317 IPR017930 -
Accr2g02049 489 MobiDBLite consensus disorder prediction 405 472 - -
Accr2g02049 489 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Accr2g02049 489 SUPERFAMILY Homeodomain-like 258 314 IPR009057 -
Accr2g02049 489 MobiDBLite consensus disorder prediction 1 46 - -
Accr2g02049 489 FunFam Myb family transcription factor 259 317 - -
Accr2g02049 489 MobiDBLite consensus disorder prediction 83 141 - -
Accr2g02049 489 MobiDBLite consensus disorder prediction 219 259 - -
Accr2g02049 489 MobiDBLite consensus disorder prediction 219 262 - -
Accr2g02049 489 MobiDBLite consensus disorder prediction 12 46 - -
Accr2g02049 489 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 233 470 IPR044848 GO:0003700
Accr2g02049 489 Pfam MYB-CC type transfactor, LHEQLE motif 345 392 IPR025756 -
Accr2g02049 489 Coils Coil 348 368 - -
Accr2g02049 489 MobiDBLite consensus disorder prediction 100 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02049 Accr-Chr2 55461495 55465881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02049 1 402 G2-like Transcription Factor Family AT4G28610 49.395 1.87e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr2g02049 Myb_DNA-binding 7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02049 - - gmx:100810560 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02049 2 55461495 55465881 Accr5g02435 5 50759857 50762951 CCT
Accr2g02049 2 55461495 55465881 Accr2g02049 2 55461495 55465881 ECH
Accr2g02049 2 55461495 55465881 Accr5g02435 5 50759857 50762951 ECH