Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02047 ATGCAAAAGCTTGTCATAAAGAAACCACATGTTGGGGCAGGCATGACAACCTTTCCAAAAGCTCCTCCTTTCCTCTTTCTTCTACTCTTACTACTCTTTCTTCCATTGCAGATCATTGCTTCTCCAAGAACTGAAGCAGAAGCTCTTCTCAAATGGAAAACAAGTCTCTCTCATCCTCTTCCTGATTTTCTCAATTCATGGTCCCTCACCAACCTCAACAATCTCTGCAGTTGGGAAGCCATTGTTTGTGATGATACTAACACAACAATCTCAGAGATAGATCTCTCTAATGCAAACCTCACCGGGACACTTGAAGAGTTGGATTTCGCTTCTCTTCCCAATCTCTCCCTATTCAACCTCAATAGCAACAGTTTCAGTGGGTCAATTCCTTCTGCACTTGGTAACCTCTCCAAGATCAGTTCCTTGGACCTGGGATTAAACTTCTTTGAAGGAACACTTCCTTCTGCACTGGGTCAGCTAAAGGAGCTTCAATATCTTAGTGTTTACTCCAACCATCTCAACGTTACTATTCCTTATCAGATCACAGATCTGCCAAAGGTATGGTACCTAGACCTTGGCGTGAACTTTTTTATTTCTCCTGCTGATTGGTCATATTATTCAGGAATGCCATCTTTAACCCACCTCAGTTTGGCGTCCAATTCTTTTACTTCCGAATTCCCAAGTTTCATACTGGAATGTCAGAACCTGACATACCTTGACATCTCTGAGAATGACATGTCTGGTCCAATACCAACTTCCATGTATACTAGTCTGGGTAAGCTTGAATATCTCAATCTTACCAATTGTGGGCTAGAAGGACCTCTGTCATCAGATTTGTTCAAGCTTTCTAATCTAAAAGAACTTCGCATGGGGAGTAACAAGTTTTCTGGTCCTATTCCCAGAGAGTTAGGATTGATGTCTGGACTTCAATGTCTTGAATTGAATGACAATTCAATCAGAGGAGAAATTCCTGCCTCACTAGGAAATCTCTGTGATCTAGTGAAGCTTGATCTCCGTGAGAATTTTTTGAATTCTAATATCCCTTCTGAGCTTGGCTTCTGTACTAATCTAACCTTCCTGGGTTTGGCAGTGAATAATTTGACTGGTCCTTTGCCTTTGTCATTATCTAAACTGACCAAAATAGCAGAATTGGGGTTATCAGAAAATTCCTTTTCAGGCCAGCTTTCTTCTTTGTTGGTTTCCAATTGGACTGACTTGATCTCTTTGCAACTTCAACACAATAAATTCACAGGAAAAATCCCGCCACAGATTGGCTTGTTGACAAAAATCAAATACTTGTATCTGTATAAGAATGACTTCTTTGGTTCCATTCCTCATGAGATTGGAAACTTGAAAGTATTGATGGAACTAGACCTTTCAGGAAACCAATTCTCAGGGCCAATTCCGTCAACTATTTGGACTCTTTCAAACATTACCACCATAAATCTTTATTCCAATAAACTCTCTGGAAACATTCCCATGGATATTGGAAACTTGACCTCTCTACAAGTTTTCGATGTCAACACTAATTATTTGCAGGGAGAGTTACCAGAGACTTTTTCTCAGCTAACTGGGTTACAGTTCTTTTCTGTATACACCAATAATTTTTCTGGCAACATTCCTAAGAACTTTGGGAAGTATAGTCCTTCTTTGAGTTCTGTAAGCTTCTCAAACAATTGCTTCTCTGGAGAACTGCCGAGTGATTTGTGCAGTGGTTTCAAAATAACACATTTGACAGTGAATAACAACACTTTTTCTGGGCCAGTACCAAACTGCTTGAGAAATTGTTCGGAACTAGTTAGAGTTCGTCTTGATGAAAATCAATTCACAGGAAACATCACAGAAGCATTTGGAGTTCATCCCAGTCTTGTCGTTGTCTCATTGAGTGGCAATCAGTTTTTTGGCGAGCTCTCCCCTTTGTGGGGTGAATGCTTAAACTTAAGCAGGATAGAAATTGACAGAAATAAACTTTCGGGTAAAATTCCACCTGAACTAGGTAAGTTGAGCCGATTGCAATATTTAAGCCTGTCCTCCAATGATTTGACTGGCTATATCCCACCTGAAATGGGCAATCTTAGCCGGATTTACATGTTCAACTTGAGCAACAACCATTTGACAGGGCAGATCCCCGAGAGTATTGCAAGATTTGCTCATCTTAATTATCTTGATTTATCAGATAACAGCTTTACTGGAAGCATACCAAAACAGCTTGGTAATCATGATGGCTTAAATAGCTTGAATTTAAGTCACAACAATCTAACTGGTGGGATACCATCTGAGCTTGGCAACCTCTTCTCGCTCCAATACCTCTTGGATCTCAGTAGCAATTCTCTTTCTGGGCCAATTCCTCAAAACCTAGAGAAGCTCAATTCTTTGATGATACTGAATCTCTCAAACAACCATCTTTCAGGGACAATCCCAGAAACATTTCCAAGTATGCTGAGCCTCCAATCTATAGATTTTTCTTATAATAACTTGACGGGTCCAATCCCAACGGGGGGTATTTTCAAAACAACACCTGCTAAAGCTTATGCTGGAAACTCGTTGTGTGGGGAAGGAAATGGATTAATTGCTTGCTCTACAGCATCTAGCCCTGAGAAGTCCAAAAGGCGAAACAAAAAGGTTCTTCTTGGGATTATCATACCTGTTTGTGGGCTATTAATCACAGGGATGATCGGATTCCTAATATTCCGTGGGCAGGCCAAACCCCTTGACGAAGAGATCAAAGATAGTGAAAAGAATGAAAACTCCTTATCTACAACAGGGGGAAGAGATGGGAAATTCACATTTGCTGAAATTGTCAAGGCAACCGAAGATTTCAATGATAGCTACTTCATAGGAGAAGGAGGATTCGGAAGAGTTTATAGAGCAGTATTACCAACAGGTCTAGTTATAGCAGTTAAAAGGCTCAATATCTCAGACTCCAGTGACATTCCAGCAGTGAACCGCCAAAGTTTTGAGAATGAGAAAAGAACACTTACCCAAGTGAGGCACCGCAATATCATCAAGTTTTATGGGTCCTGTTCCAGCCAGGGACGCATGTACCTGGTGTATGAATATATGAACAGAGGCAGTCTGGGCAAAGTGTTATACGGGGAAGAAGGTAAATTAGAACTAGACTGGCCTATAAGGATAAGAATTGTACAGGGAATAGCACATTCAATTGCCTACCTTCACAATGATTGTTCCCCACCGATAGTTCACCGAGATGTGACGATCAACAACATACTATTGGACTCAGATTTTGAACCCCGCCTTGCAGATTTTGGCACTGCAAAGCTATTAAGCTACAATTCAACAACCTGGACCTCGATTGCTGGATCCTATGGCTACATGGCTCCGGAGTTAGCACAAACCATGAGGGTGACGGAGAAATGCGATGTGTACAGCTTTGGAGTGGTGGCGTTAGAGATAGTGATGGGGAAGCACCCAGGAGATCTCCTAACTTCGATGCAGCATTTATCGTCAATGGAGGAGGATTCACAGGCGCTTCTGAAGGATGTGCTGGACCAGAGGCTACCACCTCCAAGAGGGCAATTAAGAGAAGCAATAGCGTTCATAGTGAGAGTAGGGTTGGCCTGCACGCATAACAATCCAGAGTCGAGACCAACGATGCGTTCTGTAGCAAAAGAAATTTCGGTGAAGACGCAAACATGTCTTGCAGAGCCCTTATTGGGACGATGTCCAAAGCAAAGGCAGGTTGACGGGGTGTCAGCAGTAGAATGA 3726 0.4181 MQKLVIKKPHVGAGMTTFPKAPPFLFLLLLLLFLPLQIIASPRTEAEALLKWKTSLSHPLPDFLNSWSLTNLNNLCSWEAIVCDDTNTTISEIDLSNANLTGTLEELDFASLPNLSLFNLNSNSFSGSIPSALGNLSKISSLDLGLNFFEGTLPSALGQLKELQYLSVYSNHLNVTIPYQITDLPKVWYLDLGVNFFISPADWSYYSGMPSLTHLSLASNSFTSEFPSFILECQNLTYLDISENDMSGPIPTSMYTSLGKLEYLNLTNCGLEGPLSSDLFKLSNLKELRMGSNKFSGPIPRELGLMSGLQCLELNDNSIRGEIPASLGNLCDLVKLDLRENFLNSNIPSELGFCTNLTFLGLAVNNLTGPLPLSLSKLTKIAELGLSENSFSGQLSSLLVSNWTDLISLQLQHNKFTGKIPPQIGLLTKIKYLYLYKNDFFGSIPHEIGNLKVLMELDLSGNQFSGPIPSTIWTLSNITTINLYSNKLSGNIPMDIGNLTSLQVFDVNTNYLQGELPETFSQLTGLQFFSVYTNNFSGNIPKNFGKYSPSLSSVSFSNNCFSGELPSDLCSGFKITHLTVNNNTFSGPVPNCLRNCSELVRVRLDENQFTGNITEAFGVHPSLVVVSLSGNQFFGELSPLWGECLNLSRIEIDRNKLSGKIPPELGKLSRLQYLSLSSNDLTGYIPPEMGNLSRIYMFNLSNNHLTGQIPESIARFAHLNYLDLSDNSFTGSIPKQLGNHDGLNSLNLSHNNLTGGIPSELGNLFSLQYLLDLSSNSLSGPIPQNLEKLNSLMILNLSNNHLSGTIPETFPSMLSLQSIDFSYNNLTGPIPTGGIFKTTPAKAYAGNSLCGEGNGLIACSTASSPEKSKRRNKKVLLGIIIPVCGLLITGMIGFLIFRGQAKPLDEEIKDSEKNENSLSTTGGRDGKFTFAEIVKATEDFNDSYFIGEGGFGRVYRAVLPTGLVIAVKRLNISDSSDIPAVNRQSFENEKRTLTQVRHRNIIKFYGSCSSQGRMYLVYEYMNRGSLGKVLYGEEGKLELDWPIRIRIVQGIAHSIAYLHNDCSPPIVHRDVTINNILLDSDFEPRLADFGTAKLLSYNSTTWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIVMGKHPGDLLTSMQHLSSMEEDSQALLKDVLDQRLPPPRGQLREAIAFIVRVGLACTHNNPESRPTMRSVAKEISVKTQTCLAEPLLGRCPKQRQVDGVSAVE 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02047 1241 Gene3D Ribonuclease Inhibitor 42 202 IPR032675 -
Accr2g02047 1241 ProSitePatterns Protein kinases ATP-binding region signature. 946 968 IPR017441 GO:0005524
Accr2g02047 1241 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 548 863 - -
Accr2g02047 1241 FunFam Nuclear pore complex protein NUP107 42 201 - -
Accr2g02047 1241 Gene3D Ribonuclease Inhibitor 515 859 IPR032675 -
Accr2g02047 1241 Gene3D Ribonuclease Inhibitor 203 398 IPR032675 -
Accr2g02047 1241 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 447 544 - -
Accr2g02047 1241 FunFam MDIS1-interacting receptor like kinase 2 207 399 - -
Accr2g02047 1241 ProSiteProfiles Protein kinase domain profile. 940 1225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02047 1241 SUPERFAMILY L domain-like 622 850 - -
Accr2g02047 1241 Pfam Leucine rich repeat N-terminal domain 44 84 IPR013210 -
Accr2g02047 1241 Pfam Leucine rich repeat 210 271 IPR001611 GO:0005515
Accr2g02047 1241 Gene3D Phosphorylase Kinase; domain 1 902 1020 - -
Accr2g02047 1241 FunFam Leucine-rich repeat receptor protein kinase MSP1 904 1020 - -
Accr2g02047 1241 SUPERFAMILY L domain-like 377 693 - -
Accr2g02047 1241 SUPERFAMILY RNI-like 92 399 - -
Accr2g02047 1241 Pfam Protein kinase domain 944 1210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02047 1241 FunFam MDIS1-interacting receptor like kinase 2 1021 1218 - -
Accr2g02047 1241 CDD STKc_IRAK 946 1212 - -
Accr2g02047 1241 SUPERFAMILY Protein kinase-like (PK-like) 921 1210 IPR011009 -
Accr2g02047 1241 Gene3D Transferase(Phosphotransferase) domain 1 1021 1221 - -
Accr2g02047 1241 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1066 1078 IPR008266 GO:0004672|GO:0006468
Accr2g02047 1241 Gene3D Ribonuclease Inhibitor 399 514 IPR032675 -
Accr2g02047 1241 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 770 1207 - -
Accr2g02047 1241 SMART LRR_typ_2 716 740 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 209 233 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 668 692 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 112 136 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 789 812 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 451 475 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 499 522 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 160 184 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 330 354 IPR003591 -
Accr2g02047 1241 SMART LRR_typ_2 282 306 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02047 Accr-Chr2 55429828 55433631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02047 39 662 Receptor kinase-like Gene Family AT4G08850 32.308 9.23e-79 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr2g02047 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02047 - - gmx:100809137 1575.84