Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02042 ATGAAGTGCCTATGTTCAGGGGAGCAGTTAAGAGGAGAAGACGAAATGGTTCCCTCATCCGAATCTCACGCATCCAAGGATTATTCCGTGAGTGGGGATTCTTGCACAGCTGAACAAGTTGACAAGAAGAAGCCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATTTCAGAAAGGAAACATTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATTGGTGCCATGACTCCGAAAATTAAAATTTCCCTTGCCCAAAGGGCAGAACAACCTAAGAGACACAAGAGACATTCCCAGCATTATGCAGCACCCCCAATGTCAATACATGCTGTTGGCCTATTGCTGGAATCGGTCCTCCTGAAATCAAAATCATTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCAGAAGGTTTGCCTGAAAACTTTGGTGCCGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATAGTGCCCGTGAAGCTATTGTGTCTTATAGGCGGGCACTCCTTCATCGATGGAATCTTGATGCAGAGACTACAGCAAAGATTCAAAAAGAGTTTGTCATATTTCTTCTATATAGTGGCGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTATTGATGATTTTGTTAAGAAAATTCACGTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGATCACCTTTCGTTTGCTCTATCTGTTTCTGGGGATTTGACTTCTCTAGCCAATCAATTGAAAGAATTGCTCCCTGGGATTGTCAGCCGAAGAGAAAGGTATTTTACTCTTGCTCTCTGTTATTTTGGAGCTGGAAAGGAGTTGATGGCTCTGGATCTTCTCAGAAAAGTGTTGAGTAGTAATGAAGACCCCAAACATATTCCAGCTTTGTTAATGGCATCTAAAATATGTTCTAATAACCATAGTCTTGCTGGAGAAGGGGTAAGCTTTGCTTCCAGAGTGCTTGAGAGCTCGGATGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTTCTTGCTTGGCGTTTCACATTCAGCAAATACAAAATTAGCCATTGCTGATTCTGAGAGATTTGAGAGGCAATCTGAGGCACTTCGTGCTCTGGAAACTGCTGGCAAAATGACTCAAATGAGAGACCACAATGTGTTATACCATCTTAGTTTAGAATATGCGGAACAGAGGAAGTTGGATTCTGCACTTCATTGTGCAAAATGCCTTCTAAAACTGGAAGCTGGGTCTAATGTCAAAGGGTGGCTGTTGTTAGGTCGAATATTATCAGCTCAAAAACGGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTTATTGCGAACAAAAGCTAAACTTCAAATTGCGCAGGGCCAGTTGAGGAGAGCGATTGAGACATATACTCAACTTCTTGCTGTTTTTCAAGTTCAAAAGAAAACATTTGGTTCTCTGAAGAAGCTATATAAGGAGAACAGAGATCATTCGAGGAACTTGGAAGTCGAAGTATGGCATGATCTTGCCTGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTACTCTGCTTCTAGATGTCATATAACAGGAACACTGCATGAAGCAAAGGGTCTTTACAAAGAGGCTTTAAAGGCCTTTGGTGATGCTTTGAACATTGATCCCAATTATGTGCCAAGCTTGATTTCCAGTGCCTTGGTTCTGAGACGATGCAGTTTTAGTAAGGAAGCAAATGCTGTAATGAGAAGCTTTTTGATGGATGCACTACGCCATGATAGATTGAATGATGGTGCATGGTATAATCTTGGACTTGTTCACAGGGATGAGGGTACAGTCTCGTCATTAACGGAAGCTGCAGAATGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAACCTTTCAGATGA 2157 0.4168 MKCLCSGEQLRGEDEMVPSSESHASKDYSVSGDSCTAEQVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNIEAALHVFEGIDIGAMTPKIKISLAQRAEQPKRHKRHSQHYAAPPMSIHAVGLLLESVLLKSKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPELWKLADSAREAIVSYRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILLRKFTLNRIEWDPSILDHLSFALSVSGDLTSLANQLKELLPGIVSRRERYFTLALCYFGAGKELMALDLLRKVLSSNEDPKHIPALLMASKICSNNHSLAGEGVSFASRVLESSDDRCDKLESVANFLLGVSHSANTKLAIADSERFERQSEALRALETAGKMTQMRDHNVLYHLSLEYAEQRKLDSALHCAKCLLKLEAGSNVKGWLLLGRILSAQKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRRAIETYTQLLAVFQVQKKTFGSLKKLYKENRDHSRNLEVEVWHDLACVYISLSQWHDAEMCLSKSKAIKLYSASRCHITGTLHEAKGLYKEALKAFGDALNIDPNYVPSLISSALVLRRCSFSKEANAVMRSFLMDALRHDRLNDGAWYNLGLVHRDEGTVSSLTEAAECFEAAHFLEETSPVEPFR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02042 718 PANTHER PROTEIN NPG1 1 718 IPR043376 -
Accr2g02042 718 MobiDBLite consensus disorder prediction 37 53 - -
Accr2g02042 718 Pfam Tetratricopeptide repeat 451 507 - -
Accr2g02042 718 Gene3D Tetratricopeptide repeat domain 38 403 IPR011990 GO:0005515
Accr2g02042 718 Gene3D Tetratricopeptide repeat domain 570 714 IPR011990 GO:0005515
Accr2g02042 718 Gene3D Tetratricopeptide repeat domain 414 569 IPR011990 GO:0005515
Accr2g02042 718 MobiDBLite consensus disorder prediction 1 55 - -
Accr2g02042 718 SUPERFAMILY TPR-like 293 474 IPR011990 GO:0005515
Accr2g02042 718 SUPERFAMILY TPR-like 439 661 IPR011990 GO:0005515
Accr2g02042 718 ProSiteProfiles TPR repeat profile. 604 637 IPR019734 GO:0005515
Accr2g02042 718 MobiDBLite consensus disorder prediction 22 36 - -
Accr2g02042 718 SMART tpr_5 443 476 IPR019734 GO:0005515
Accr2g02042 718 SMART tpr_5 321 354 IPR019734 GO:0005515
Accr2g02042 718 SMART tpr_5 604 637 IPR019734 GO:0005515
Accr2g02042 718 SMART tpr_5 514 547 IPR019734 GO:0005515
Accr2g02042 718 SMART tpr_5 478 511 IPR019734 GO:0005515
Accr2g02042 718 SMART tpr_5 676 712 IPR019734 GO:0005515
Accr2g02042 718 SMART tpr_5 570 603 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02042 Accr-Chr2 55358207 55362922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02042 1 718 Calmodulin-binding Proteins AT4G28600 57.634 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02042 K21843 - gmx:100800762 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02444 5 50816738 50820397 Accr2g02042 2 55358207 55362922 CCT
Accr2g02042 2 55358207 55362922 Accr2g02042 2 55358207 55362922 ECH