Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02041 ATGAAAAGTAGAATCAGAGAAAGAAGGAAGCGCGATACCAGCAGGAGGTTGCGGAGGATAATGAAGTGCCTATGTTCAGGGGAGCAGTTAAGAGGAGAAGACGAAATGGTTCCCTCATCCGAATCTCACGCATCCAAGGATTATTCCGTGAGTGGGGATTCTTGCACAGCTGAACAAGTTGACAAGAAGAAGCCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATTTCAGAAAGGAAACATTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATTGGTGCCATGACTCCGAAAATTAAAATTTCCCTTGCCCAAAGGGCAGAACAACCTAAGAGACACAAGAGACATTCCCAGCATTATGCAGCACCCCCAATGTCAATACATGCTGTTGGCCTATTGCTGGAATCGGTCCTCCTGAAATCAAAATCATTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCAGAAGGTTTGCCTGAAAACTTTGGTGCCGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATAGTGCCCGTGAAGCTATTGTGTCTTATAGGCGGGCACTCCTTCATCGATGGAATCTTGATGCAGAGACTACAGCAAAGATTCAAAAAGAGTTTGTCATATTTCTTCTATATAGTGGCGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTATTGATGATTTTGTTAAGAAAATTCACGTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGATCACCTTTCGTTTGCTCTATCTGTTTCTGGGGATTTGACTTCTCTAGCCAATCAATTGAAAGAATTGCTCCCTGGGATTGTCAGCCGAAGAGAAAGGTATTTTACTCTTGCTCTCTGTTATTTTGGAGCTGGAAAGGAGTTGATGGCTCTGGATCTTCTCAGAAAAGTGTTGAGTAGTAATGAAGACCCCAAACATATTCCAGCTTTGTTAATGGCATCTAAAATATGTTCTAATAACCATAGTCTTGCTGGAGAAGGGGTAAGCTTTGCTTCCAGAGTGCTTGAGAGCTCGGATGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTTCTTGCTTGGCGTTTCACATTCAGCAAATACAAAATTAGCCATTGCTGATTCTGAGAGATTTGAGAGGCAATCTGAGGCACTTCGTGCTCTGGAAACTGCTGGCAAAATGACTCAAATGAGAGACCACAATGTGTTATACCATCTTAGTTTAGAATATGCGGAACAGAGGAAGTTGGATTCTGCACTTCATTGTGCAAAATGCCTTCTAAAACTGGAAGCTGGGTCTAATGTCAAAGGGTGGCTGTTGTTAGGTCGAATATTATCAGCTCAAAAACGGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTTATTGCGAACAAAAGCTAAACTTCAAATTGCGCAGGGCCAGTTGAGGAGAGCGATTGAGACATATACTCAACTTCTTGCTGTTTTTCAAGTTCAAAAGAAAACATTTGGTTCTCTGAAGAAGCTATATAAGGAGAACAGAGATCATTCGAGGAACTTGGAAGTCGAAGTATGGCATGATCTTGCCTGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTACTCTGCTTCTAGATGTCATATAACAGGAACACTGCATGAAGCAAAGGGTCTTTACAAAGAGGCTTTAAAGGCCTTTGGTGATGCTTTGAACATTGATCCCAATTATGTGCCAAGCTTGATTTCCAGTGCCTTGGTTCTGAGACGATGCAGTTTTAGTAAGGAAGCAAATGCTGTAATGAGAAGCTTTTTGATGGATGCACTACGCCATGATAGATTGAATGATGGTGCATGGTATAATCTTGGACTTGTTCACAGGGATGAGGGTACAGTCTCGTCATTAACGGAAGCTGCAGAATGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAACCTTTCAGATGA 2217 0.4181 MKSRIRERRKRDTSRRLRRIMKCLCSGEQLRGEDEMVPSSESHASKDYSVSGDSCTAEQVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNIEAALHVFEGIDIGAMTPKIKISLAQRAEQPKRHKRHSQHYAAPPMSIHAVGLLLESVLLKSKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPELWKLADSAREAIVSYRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILLRKFTLNRIEWDPSILDHLSFALSVSGDLTSLANQLKELLPGIVSRRERYFTLALCYFGAGKELMALDLLRKVLSSNEDPKHIPALLMASKICSNNHSLAGEGVSFASRVLESSDDRCDKLESVANFLLGVSHSANTKLAIADSERFERQSEALRALETAGKMTQMRDHNVLYHLSLEYAEQRKLDSALHCAKCLLKLEAGSNVKGWLLLGRILSAQKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRRAIETYTQLLAVFQVQKKTFGSLKKLYKENRDHSRNLEVEVWHDLACVYISLSQWHDAEMCLSKSKAIKLYSASRCHITGTLHEAKGLYKEALKAFGDALNIDPNYVPSLISSALVLRRCSFSKEANAVMRSFLMDALRHDRLNDGAWYNLGLVHRDEGTVSSLTEAAECFEAAHFLEETSPVEPFR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02041 738 Gene3D Tetratricopeptide repeat domain 156 423 IPR011990 GO:0005515
Accr2g02041 738 SUPERFAMILY TPR-like 313 494 IPR011990 GO:0005515
Accr2g02041 738 MobiDBLite consensus disorder prediction 57 73 - -
Accr2g02041 738 Gene3D Tetratricopeptide repeat domain 574 734 IPR011990 GO:0005515
Accr2g02041 738 ProSiteProfiles TPR repeat profile. 624 657 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 696 732 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 590 623 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 534 567 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 341 374 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 624 657 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 498 531 IPR019734 GO:0005515
Accr2g02041 738 SMART tpr_5 463 496 IPR019734 GO:0005515
Accr2g02041 738 PANTHER PROTEIN NPG1 21 738 IPR043376 -
Accr2g02041 738 Pfam Tetratricopeptide repeat 471 527 - -
Accr2g02041 738 Gene3D Tetratricopeptide repeat domain 438 573 IPR011990 GO:0005515
Accr2g02041 738 MobiDBLite consensus disorder prediction 42 56 - -
Accr2g02041 738 MobiDBLite consensus disorder prediction 31 75 - -
Accr2g02041 738 SUPERFAMILY TPR-like 458 680 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02041 Accr-Chr2 55358147 55362922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02041 8 738 Calmodulin-binding Proteins AT4G28600 57.162 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02041 K21843 - gmx:100800762 1043.11