Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02029 ATGGATCATTTGGTTGGTGGGAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGTTCTTTTGGGGAGCTTTATTTAGGCGTAAATGTGCAAAATGGAGAGGAGGTGGCCGTTAAGCTGGAACCTGTGAAGACCAGGCATCCTCAACTTTTCTATGAGTCAAAACTGTATATGGTTCTTCAGGGAGGAACGGGGATTCCCCACATCAAATGGTTTGGAGTCGAGGGAGACTATAATGTCATGGTTATTGACCTCCTTGGACCAAGTTTGGAAGATTTGTTCAACTATTGCAACCGGAAATTCACGTTGAAGACTGTGTTAATGCTTGCTGATCAATTAATTAATAGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGATTTAAAGCCTGACAATTTTCTCATGGGCCTAGGACGTAAAGCAAATCAGGTGTACATAATTGACTATGGCCTTGCGAAGAAGTATAGGGATCTTCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCAAGTGTGAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAAAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACAAAAAAGCAAAAATATGATAAGATTAGTGAGAAGAAGGCATCAACCCCAATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCTTTCTTCCACTACTGCCGATCATTGCGTTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGACTTTTTCGAGACTTATTTATTAGAGAAGGCTATCAGTTTGACTATGTTTTCGATTGGACTATATTGAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGCATGCCAGTGGCAAAGCAGCTATGAATGCAGGACCATCTATACAAAAGCCAGAAAAGATGTCAGTTGGGAAAGATCCTCGAGAGAAATTCTCTGGCCCTGTTGAAGCATTCTCCAGGAGAAACCCCACAAATCCTAGTCCTCGGGCTGATCAAGCTAAGCAAAGGATGTTTGAGGATGTACAGCAACATAAGGATATGCGTGAACAAGAGAAGGTAATCAGTTCTGCTCGATATGGAAGCAGTTCAAGGAAAGCCCTCTTTTCATCAAACAAGCCAAGTTCGTCAGCTGACCAGAGCGATACTCGTACTGGTCGGCTGACTACAAGCAGTAGCCGCCCTTCTACCACACGTGCGTTGTACGAGAGCAAACCGCCAAGTTTCACACGCAATACATCTACTCGAGGCAATCGTGATGATCCTCTTAGGAGCTTTGAGCTTCTCTCTATCAGGAAGTAA 1371 0.4303 MDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKTRHPQLFYESKLYMVLQGGTGIPHIKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLKGSLPWQGLKAGTKKQKYDKISEKKASTPIEVLCKSYPSEFVSFFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHASGKAAMNAGPSIQKPEKMSVGKDPREKFSGPVEAFSRRNPTNPSPRADQAKQRMFEDVQQHKDMREQEKVISSARYGSSSRKALFSSNKPSSSADQSDTRTGRLTTSSSRPSTTRALYESKPPSFTRNTSTRGNRDDPLRSFELLSIRK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02029 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Accr2g02029 456 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Accr2g02029 456 CDD STKc_CK1_delta_epsilon 8 282 - -
Accr2g02029 456 MobiDBLite consensus disorder prediction 300 456 - -
Accr2g02029 456 MobiDBLite consensus disorder prediction 379 439 - -
Accr2g02029 456 MobiDBLite consensus disorder prediction 325 339 - -
Accr2g02029 456 FunFam Putative Casein kinase I 1 85 - -
Accr2g02029 456 Pfam Protein kinase domain 10 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02029 456 MobiDBLite consensus disorder prediction 357 377 - -
Accr2g02029 456 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02029 456 PANTHER CASEIN KINASE-RELATED 13 392 - -
Accr2g02029 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02029 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Accr2g02029 456 MobiDBLite consensus disorder prediction 440 456 - -
Accr2g02029 456 FunFam Casein kinase 1-like protein 1 330 - -
Accr2g02029 456 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02029 Accr-Chr2 55188382 55193855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02029 11 281 MAP Kinase Kinase Kinase AT1G62400 26.950 1.88e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Accr2g02029 Pkinase 4.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02029 K08960 - gmx:100807882 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02029 2 55188382 55193855 Accr2g02029 2 55188382 55193855 ECH