Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02020 ATGGGTCTTAGAGATATTGGAGCTTCACTACCACCTGGGTTTCGGTTTTATCCGAGTGATGAAGAATTGGTGTGTCATTATCTGTACAAGAAGATCTCCAACGAGGAAGCTCTGAAGGGGACTTTGGTCGAAATCGACTTGCACACATGCGAGCCCTGGCAGCTTCCTGAAGTGGCTAAGCTCAACGCGAATGAGTGGTACTTCTTCAGCTTCCGTGACCGCAAATACGCGACGGGGTACCGGACCAATAGGGCGACGACATCTGGATACTGGAAAGCCACAGGGAAGGATCGGACGGTGGTTAATCCCATCACGAGAGAGGTTGTAGGGATGAGGAAGACGCTTGTGTTCTACAGGAACAGAGCTCCCAATGGTATCAAAACGGGTTGGATCATGCATGAGTTTCGCTTGGAAACTCCACATATGCCTCCTAAGGAAGACTGGGTTTTGTGTAGAGTACTTCACAAAAACAAATCATCAGATGAAAGCAGCAGCAGCAGCAGCAGACTCATGTTGGACTCTATTTCATCTCCTTCCCTAACTCTGGCTTCTTCATCTTCTCCAACGACCAACCACCATACATACCCTCTCCTCACCTACAATAACCAACTTTCTTCTTCATCCTCAATCCGTACCTTCATTAATAACCACGATCACACCCAACCCAATCATCATTCTAATAATGCCCTCGTCAACTTCCTTCAATTTTCTGGGGAAACAAACACCGCCGCCACCAGCACCATCACTCAGCAGGACCAGATTAGCCCCAGAGGAGGAGGAGACGGTGGCGGTGGCGATCACGGTGGTTATGGCTTCTTCAGTTGGGACATGGGCCTTGAAGATAACGCCAGCTTTCAGAATGGCCTCGACGCTATGAGATCATCATTCGAGGTTGACAATAGTAGCATGGTCTTGTTATGA 921 0.4864 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVVNPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVLHKNKSSDESSSSSSRLMLDSISSPSLTLASSSSPTTNHHTYPLLTYNNQLSSSSSIRTFINNHDHTQPNHHSNNALVNFLQFSGETNTAATSTITQQDQISPRGGGDGGGGDHGGYGFFSWDMGLEDNASFQNGLDAMRSSFEVDNSSMVLL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02020 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 219 - -
Accr2g02020 306 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Accr2g02020 306 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Accr2g02020 306 MobiDBLite consensus disorder prediction 247 266 - -
Accr2g02020 306 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Accr2g02020 306 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02020 Accr-Chr2 55096017 55099836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02020 6 157 NAC Transcription Factor Family AT1G56010 58.125 9.95e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g02020 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02020 - - gmx:100783645 397.897