Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02019 ATGGAATTGAAAAAAAGTAGAATGTCTGGGAAATCCAAAAATAAAGAAATCCCTCCAGCTCCCCCTGGTTTTAGATCCCTTACTTCTTTCACACTACAAAAGGTTGCAAAGACTGATAAATCTGAATGTGATCCAATTTGCATGGAGAGTATATTGAAGCTAGATGACGCTGCTGCATTTAAGGCAATTCTTAGGCATCGTCCATGGATACATTTTGATCAAAGTGACCATGACCTTGAGAAATCCGACACAGAGCAGTTTCCTCAGGGTTTTTCTTCAAATGCTTGTCGTCCGAAAGGGGTTACTCTCGGTTGTCCAGACTGTAGTGATTGCGTAAAGGTAGCTGCAAGGTGGCACCCTGAGGATGCAAGAAGAGATGTCCTTGATGAAGCTCAAATTTTCCGCCCAACAGAAGAGGAATTCAAAGACACGCTTGAATATATTGCAAGCATACGTTCCAAAGCAGAGCCTTACGGAATTTGTCGTATTATTCCTCCTCCTACCTGGCAACCACAATGTCTTCTCAAGGAAAAAGACATATGGGAAAACTCCAAATTTGTTACTCAGATTCAACGGATTGATGGACTTCAAGTTCAGTGCCAACGAGAAGTTATGGACAACTCTTCCATAAATTCGGAGACCAAGGCCAGAAGAGGTCTAACAGTAGCTTTGGACTCTCAACCTGGTAATGAAAATCCACATGATGTTGAAGACTCTGAGTCTAAACTTGGCCCTACCTTCAGTCTCAGTACATTTAAGAAATTTGCTGATGATTTCAACGCCAAGTACTTTGACTGTGACAATAGTGTTGTGGGTTCTGATGAAAAGTTGGAGCAATATGTGGAAAATATTGAGGGTGAGTATGGACGGATTATCCAAAATCCAACTCATGAAATTGAGGTGCTTGTTGGTAACAACTTGGGTGATGGAGTTTTAAGCAGTGGATTTCCAATGATTTCTGATCCTCTGGAGTCACTCAAATATCCTGAATGTATGAGATCTGGATGGAACTTAAATAACATGTGTATGCAATCTGGTTCTCTTCTTTCATTTGAAAGCTTGGAGGTTTCTAGCAAATTTACCCCTCAGGTTCATGTTGGAATGTGTTTTTCTTCATTCAATTGGGAAGTAAAAGAGCACCACTTGTACTCATTGTGTTACATGCATGTGGGTGAGCCTAGAGTTTGGTATAGCATTCCGGGAAGATTTGCTGCTGACTTTGAAACAGTGAGGAAGGAGCATCTCCTGGTTTTGTTTGCAAAACAGCCCGACTCGCATGACAATTTGTTATCCTCCACCTTATTGAAGTCAAAGGGTATACCAGTATATCGCTGTGTTCAGTATCCCCGGGAGTTTGTTCTTGTCTTCCCAGGAGCATACCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTCAGTTTTGCTCCTCTTGATTGGCTGCTTCATGGGCAGAAAGTTGTAGAGTTATATTGTGAACAAAGGAGAAAGACTTCAATCTCATACGATAAGCTGTTACTTGGGGCAGCAAGAAAAGCTGTTACGGCACAATTTAAGATTGAATTCTCTAGGGCAGCTAACCCAGATCATTTAAAATGGAAAGATGCATGTGGAAAGAATGGGAAATTAACAAAAGCTTTTGATTTGCGGAGAAAGATTGAAAGTTCAAAGAGGGAATTTCTTTGCGCTTCTCTGAAATCTCAGAGAATGGAAAAAGATTTTGATGCCACTTGCAAAAGAGAATGTTGCATATGTCTGCGTGACTTACACTTATCTGCCGTAGGTTGTCCATGTTCAACCGAAAAATTTGCATGTCTTAATCATGCAAAGCAGCTCTGTCGTTGCCCTTGGAGTGACAGATTTATCATCTGCCGATATGAAATGACTGAGTTGGATACCCTCCAGCTTGCTTTGGAGGGAAAAGCAAGTGCTATCCACAGATGGGCCAAGGCTGATTGTGGATTAACTGTGGTTTCCCTCGCCTCCAAAAGAATTGCGAGTGGTTCCCCGCCTAGTCCAAGCGCAAGAGAAGCATTTTTGAATTCACTGAAACGGAGAAGAGAAGGATTCGAGTCAGAAGGTACCGGCACTGATGGCATTGAGGCAAAATCGAAGGTAAAAAAACAGAAAACGGCAGGCCACCAATCTACAGCAAAACATGGGGTCGAATCTGCTGCGGCCATTAAACCTGATCCCAAGGCACGCAATGTTCAGTCATCAACTCCAAATTTGGCTAAAGATGACCCAAAAGTGGCTAAGGATTTTCTAGGTCTTGGCTTAACGTCAGGTTGTATGGCAATGCTGCCTGAGATCAGGGCACTAGATGTTTCTTCAGATAGTTCATCAGAATCCAATGACGACGACGACGCTTAA 2376 0.4221 MELKKSRMSGKSKNKEIPPAPPGFRSLTSFTLQKVAKTDKSECDPICMESILKLDDAAAFKAILRHRPWIHFDQSDHDLEKSDTEQFPQGFSSNACRPKGVTLGCPDCSDCVKVAARWHPEDARRDVLDEAQIFRPTEEEFKDTLEYIASIRSKAEPYGICRIIPPPTWQPQCLLKEKDIWENSKFVTQIQRIDGLQVQCQREVMDNSSINSETKARRGLTVALDSQPGNENPHDVEDSESKLGPTFSLSTFKKFADDFNAKYFDCDNSVVGSDEKLEQYVENIEGEYGRIIQNPTHEIEVLVGNNLGDGVLSSGFPMISDPLESLKYPECMRSGWNLNNMCMQSGSLLSFESLEVSSKFTPQVHVGMCFSSFNWEVKEHHLYSLCYMHVGEPRVWYSIPGRFAADFETVRKEHLLVLFAKQPDSHDNLLSSTLLKSKGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVSFAPLDWLLHGQKVVELYCEQRRKTSISYDKLLLGAARKAVTAQFKIEFSRAANPDHLKWKDACGKNGKLTKAFDLRRKIESSKREFLCASLKSQRMEKDFDATCKRECCICLRDLHLSAVGCPCSTEKFACLNHAKQLCRCPWSDRFIICRYEMTELDTLQLALEGKASAIHRWAKADCGLTVVSLASKRIASGSPPSPSAREAFLNSLKRRREGFESEGTGTDGIEAKSKVKKQKTAGHQSTAKHGVESAAAIKPDPKARNVQSSTPNLAKDDPKVAKDFLGLGLTSGCMAMLPEIRALDVSSDSSSESNDDDDA 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02019 791 SUPERFAMILY Clavaminate synthase-like 246 514 - -
Accr2g02019 791 Pfam jmjN domain 133 165 IPR003349 -
Accr2g02019 791 Pfam JmjC domain, hydroxylase 363 476 IPR003347 -
Accr2g02019 791 Gene3D Cupin 116 477 - -
Accr2g02019 791 MobiDBLite consensus disorder prediction 690 709 - -
Accr2g02019 791 PANTHER LYSINE-SPECIFIC DEMETHYLASE 126 706 - -
Accr2g02019 791 MobiDBLite consensus disorder prediction 690 750 - -
Accr2g02019 791 Pfam C5HC2 zinc finger 583 635 IPR004198 -
Accr2g02019 791 ProSiteProfiles JmjC domain profile. 330 493 IPR003347 -
Accr2g02019 791 SMART JmjN_1 130 171 IPR003349 -
Accr2g02019 791 MobiDBLite consensus disorder prediction 1 25 - -
Accr2g02019 791 ProSiteProfiles JmjN domain profile. 131 172 IPR003349 -
Accr2g02019 791 SMART cupin_9 333 493 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02019 Accr-Chr2 55083755 55089488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02019 7 658 JUMONJI Transcription Factor Family AT1G08620 44.622 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr2g02019 JmjC 8.9e-30 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02019 K11446 - pcin:129315581 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02019 2 55083755 55089488 Accr2g02019 2 55083755 55089488 ECH