Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02008 ATGGGAAGAGCTCCGTGCTGCCAGAAAGTGGGATTGAAGAGAGGTCCTTGGACTGCAGAAGAAGATCAGATTCTGATCAATCATGTCAACAAATATGGCCACAGTAATTGGCGTGCTCTCCCCAAATTAGCTGGGCTTCTGAGGTGTGGAAAAAGTTGCAGACTCCGATGGATCAATTATTTGAAGCCAGACATCAAGCGAGGAAATTTCACCCAAGAAGAAGAAGATACCATCATCAAGCTTCATGAAATGTTGGGAAACAGATGGTCAGAAATAGCAGCCAAGTTACCAGGCCGCACAGACAACGAAATAAAGAATGTATGGCACACACACTTGAAGAAGAGGCTTCCACATAATTACCAACAGAACCATCCCCAAACAAAACGAAAACAGAAACAAAAGGAACCACAACAACAACACACCGCCGTGACGGTGGAGAACAACAGGCCACCACTCTCTCCTTCACATTCAAGTGATGTGTCCACCCTCACCACCACAAACAGCGATAATAGTATAATTACGACCAGTAGTACTCCGGCGACTAATAACGATGACGACATGTCCATGAATAATAATGTTGATGAGTCTCCGGCACCGGCGGAGGAATCCCTGGCATTGGACGATGATTTCTGGTCGGAAGTCCTTTCAGCTGATAACTCCGAGGGGACTACTGATTATATTCCGCCAGCCGGAGCCGGCAGCGATGTGGTGTCAGAGTTTCAGTTCCTGTTCTCTCAACTAGACGAGGCGCAAGTCGAAGGAGATCATGTGAGTTCGTTAAGTATGGGCGATGACATGGATTTTTGGTTTGATGTTTACAATAGAGCCGAGGAATTCACAGAGCTACCTCAGTTATGA 858 0.4639 MGRAPCCQKVGLKRGPWTAEEDQILINHVNKYGHSNWRALPKLAGLLRCGKSCRLRWINYLKPDIKRGNFTQEEEDTIIKLHEMLGNRWSEIAAKLPGRTDNEIKNVWHTHLKKRLPHNYQQNHPQTKRKQKQKEPQQQHTAVTVENNRPPLSPSHSSDVSTLTTTNSDNSIITTSSTPATNNDDDMSMNNNVDESPAPAEESLALDDDFWSEVLSADNSEGTTDYIPPAGAGSDVVSEFQFLFSQLDEAQVEGDHVSSLSMGDDMDFWFDVYNRAEEFTELPQL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02008 285 CDD SANT 69 112 IPR001005 -
Accr2g02008 285 MobiDBLite consensus disorder prediction 137 197 - -
Accr2g02008 285 FunFam Transcription factor MYB15 68 142 - -
Accr2g02008 285 CDD SANT 16 61 IPR001005 -
Accr2g02008 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr2g02008 285 Gene3D - 11 67 - -
Accr2g02008 285 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr2g02008 285 Gene3D - 69 144 - -
Accr2g02008 285 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr2g02008 285 SMART sant 13 63 IPR001005 -
Accr2g02008 285 SMART sant 66 114 IPR001005 -
Accr2g02008 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr2g02008 285 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr2g02008 285 FunFam MYB-related transcription factor 13 66 - -
Accr2g02008 285 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr2g02008 285 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr2g02008 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Accr2g02008 285 MobiDBLite consensus disorder prediction 114 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02008 Accr-Chr2 54947898 54949404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02008 1 285 MYB Transcription Factor Family AT2G31180 50.000 7.32e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g02008 Myb_DNA-binding 3.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02008 K09422 - gmx:100802214 309.301