Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02004 ATGGATTCAGATTCCTTCTTCTTGCAATACACACAACATGAGTGCTGCCCCCTTGATTCCTTTGTTTCTGAAGCATCATCAATGTCCTTCTGGGACGACCTCCTACTCTTCAACGACAACAACACCAACTTCTTTTCACAAGATCATACCATGATGTCCATGTCTTCCGATGTTGTAGCCTCCAAGAATTCATCATCGTCGACGGAGTCCAATTCTTCAGGCTCGGAGGCAGTGCAAGAAGTCTCCTCCTGCTCCAAAGTGGAAGATAAAGAGAAGAGGGTGTACAGAGGAGTGAGGAGGCGGCCGTGGGGGAAATACGCAGCGGAGATAAGGGACTCCACCAGAAAAGGGGTGAGAGTGTGGATCGGAACATTTGACACGGCAGAGGAAGCCGCCTTGGCGTATGATCAGGCGGCATTATCGACCCGAGGGTCTCAGGCAGTACTCAACTTCCCGGAGGAAGTGGTAAGAGAATCGCTGAGGAAGATGCCTCACAAGACATGGCAAGAAGCTTGCTCTCCGGTGTTAGCCCTCAAGAAGAAACACACTTCCACACGAAAGTCAAAGTCAAAATTAAACTCCAGAACTCATCCTCTCGCCAGAACCCAAATCCAATCTGCTCATCATCAACCTGCGTTGGAGCTGGAGGATTTGGGAGCCGACTATCTTGAACAACTCTTGACTCTCACTTGTCATTGA 699 0.4936 MDSDSFFLQYTQHECCPLDSFVSEASSMSFWDDLLLFNDNNTNFFSQDHTMMSMSSDVVASKNSSSSTESNSSGSEAVQEVSSCSKVEDKEKRVYRGVRRRPWGKYAAEIRDSTRKGVRVWIGTFDTAEEAALAYDQAALSTRGSQAVLNFPEEVVRESLRKMPHKTWQEACSPVLALKKKHTSTRKSKSKLNSRTHPLARTQIQSAHHQPALELEDLGADYLEQLLTLTCH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02004 232 SMART rav1_2 94 158 IPR001471 GO:0003700|GO:0006355
Accr2g02004 232 FunFam Ethylene-responsive transcription factor 2 93 153 - -
Accr2g02004 232 ProSiteProfiles AP2/ERF domain profile. 94 152 IPR001471 GO:0003700|GO:0006355
Accr2g02004 232 MobiDBLite consensus disorder prediction 61 82 - -
Accr2g02004 232 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Accr2g02004 232 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Accr2g02004 232 SUPERFAMILY DNA-binding domain 94 153 IPR016177 GO:0003677
Accr2g02004 232 MobiDBLite consensus disorder prediction 61 84 - -
Accr2g02004 232 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Accr2g02004 232 PANTHER DNA-BINDING DOMAIN 60 226 IPR044808 GO:0003700|GO:0009873
Accr2g02004 232 CDD AP2 95 153 IPR001471 GO:0003700|GO:0006355
Accr2g02004 232 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02004 Accr-Chr2 54871142 54871840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02004 39 231 AP2-EREBP Transcription Factor Family AT2G31230 43.925 1.59e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02004 AP2 6.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02004 K14516 - gmx:100801682 181.415