Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02001 ATGTCATCGCCGTCAACGCAGCAGCCATTGCCAGATTTGGAGTTTTGGCAGGATACCTCTGATCCTTTCTTGGTCTCTTCATCAAGAGATCAAGTTCATGGAGACCCTTTCCACGATTATCTTTGCTTCGATATGATCGACAGGGAGGCAAATCAAGTGCCGGCGAGTTGGGAAGGCATTGGAGCAAAGAAGACTGTGGAGGAAAAAACATACATCGGGGTGAGGAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGTATCAGAGTTTGGTTGGGAACGTTCGAGAGTGAAGAGGAGGCTGCTTTAGCTTACGACCAAGCTGCGTTCACCATGAGAGGCAACAACGCTGTTCTTAATTTTCCAGTGCAAAAGGTGAAGGAATCTCTACAACACATCCAGTATGGTTGCCGCGAAGGGTATTCGCCTGCTTTAGCACTCAAAGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGGTAAAGCCAAACAGCAATCATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGCTGAATATCTGGAGCAACTTCTCACCATTTCTGATTAA 597 0.4724 MSSPSTQQPLPDLEFWQDTSDPFLVSSSRDQVHGDPFHDYLCFDMIDREANQVPASWEGIGAKKTVEEKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESEEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLQHIQYGCREGYSPALALKERHYIQRKLSSKAKKGKAKQQSSEVVVLEDLGAEYLEQLLTISD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02001 198 SUPERFAMILY DNA-binding domain 70 129 IPR016177 GO:0003677
Accr2g02001 198 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Accr2g02001 198 PANTHER DNA-BINDING DOMAIN 65 193 IPR044808 GO:0003700|GO:0009873
Accr2g02001 198 CDD AP2 71 130 IPR001471 GO:0003700|GO:0006355
Accr2g02001 198 FunFam Ethylene-responsive transcription factor 2 69 130 - -
Accr2g02001 198 Gene3D AP2/ERF domain 69 130 IPR036955 GO:0003700|GO:0006355
Accr2g02001 198 PRINTS Ethylene responsive element binding protein signature 110 130 IPR001471 GO:0003700|GO:0006355
Accr2g02001 198 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Accr2g02001 198 Pfam AP2 domain 71 120 IPR001471 GO:0003700|GO:0006355
Accr2g02001 198 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02001 Accr-Chr2 54789629 54790225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02001 46 198 AP2-EREBP Transcription Factor Family AT3G23240 54.140 5.57e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02001 AP2 8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02001 K14516 - gmx:100527364 213.001