Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01999 ATGGAGGCCAGCATGTCATCGCCGTCAACGCAGCAGCCATTGCCAGATTTGGAGTTTTGGCAGGACAACTCTGATCCTTTCTTGGTCTCTTCATCAAGAGATCAAGTTCATGGAGACCCTTTCCACGATTATCTTTGCTTCGATATGATCGACAGGGGGGCAAATCAATCGTCGGCGAGTTGGGAAGGCATTGGAGCAAAGACGACTGTGGAGGCGAAAACATACATAGGGGTGAGGAAGAGGCCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGTATCAGAGTTTGGCTGGGAACGTTCGAGAGTGAAGAGGAGGCTGCTTTAGCTTACGACCAAGCTGCATTCACCATGAGAGGCAACAATGCTGTTCTTAATTTTCCAGTGCAAAAGGTGAAGGAATCTCTGGAACACATCCAGTATGGTTGCCGCGAAGGGTATTCGCCTGCTTTAGCTCTAAAAGAGAGGCACTACATCCGAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAGCCAAACAGCAATCATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGCTGAATATCTGGAGAAACTTCTCACCATTTCTGATCAAACTACAAGCTAG 621 0.4815 MEASMSSPSTQQPLPDLEFWQDNSDPFLVSSSRDQVHGDPFHDYLCFDMIDRGANQSSASWEGIGAKTTVEAKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESEEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLEHIQYGCREGYSPALALKERHYIRRKLSSKAKKGKAKQQSSEVVVLEDLGAEYLEKLLTISDQTTS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01999 206 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Accr2g01999 206 FunFam Ethylene-responsive transcription factor 2 73 134 - -
Accr2g01999 206 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Accr2g01999 206 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Accr2g01999 206 SUPERFAMILY DNA-binding domain 74 133 IPR016177 GO:0003677
Accr2g01999 206 CDD AP2 75 134 IPR001471 GO:0003700|GO:0006355
Accr2g01999 206 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Accr2g01999 206 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Accr2g01999 206 Gene3D AP2/ERF domain 73 134 IPR036955 GO:0003700|GO:0006355
Accr2g01999 206 PANTHER DNA-BINDING DOMAIN 59 199 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01999 Accr-Chr2 54712724 54713344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01999 73 204 AP2-EREBP Transcription Factor Family AT3G23240 59.559 5.28e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g01999 AP2 8.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01999 K14516 - gmx:100527364 209.149