Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g01999 | ATGGAGGCCAGCATGTCATCGCCGTCAACGCAGCAGCCATTGCCAGATTTGGAGTTTTGGCAGGACAACTCTGATCCTTTCTTGGTCTCTTCATCAAGAGATCAAGTTCATGGAGACCCTTTCCACGATTATCTTTGCTTCGATATGATCGACAGGGGGGCAAATCAATCGTCGGCGAGTTGGGAAGGCATTGGAGCAAAGACGACTGTGGAGGCGAAAACATACATAGGGGTGAGGAAGAGGCCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGTATCAGAGTTTGGCTGGGAACGTTCGAGAGTGAAGAGGAGGCTGCTTTAGCTTACGACCAAGCTGCATTCACCATGAGAGGCAACAATGCTGTTCTTAATTTTCCAGTGCAAAAGGTGAAGGAATCTCTGGAACACATCCAGTATGGTTGCCGCGAAGGGTATTCGCCTGCTTTAGCTCTAAAAGAGAGGCACTACATCCGAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAGCCAAACAGCAATCATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGCTGAATATCTGGAGAAACTTCTCACCATTTCTGATCAAACTACAAGCTAG | 621 | 0.4815 | MEASMSSPSTQQPLPDLEFWQDNSDPFLVSSSRDQVHGDPFHDYLCFDMIDRGANQSSASWEGIGAKTTVEAKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESEEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLEHIQYGCREGYSPALALKERHYIRRKLSSKAKKGKAKQQSSEVVVLEDLGAEYLEKLLTISDQTTS | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g01999 | 206 | SMART | rav1_2 | 74 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | FunFam | Ethylene-responsive transcription factor 2 | 73 | 134 | - | - | |
Accr2g01999 | 206 | PRINTS | Ethylene responsive element binding protein signature | 75 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | PRINTS | Ethylene responsive element binding protein signature | 114 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | SUPERFAMILY | DNA-binding domain | 74 | 133 | IPR016177 | GO:0003677 | |
Accr2g01999 | 206 | CDD | AP2 | 75 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | ProSiteProfiles | AP2/ERF domain profile. | 74 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | Pfam | AP2 domain | 75 | 124 | IPR001471 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | Gene3D | AP2/ERF domain | 73 | 134 | IPR036955 | GO:0003700|GO:0006355 | |
Accr2g01999 | 206 | PANTHER | DNA-BINDING DOMAIN | 59 | 199 | IPR044808 | GO:0003700|GO:0009873 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g01999 | Accr-Chr2 | 54712724 | 54713344 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g01999 | 73 | 204 | AP2-EREBP Transcription Factor Family | AT3G23240 | 59.559 | 5.28e-53 | 167 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Accr2g01999 | AP2 | 8.7e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g01999 | K14516 | - | gmx:100527364 | 209.149 |