Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01995 ATGTCTTTTCCATCCTATCAGCAGCCATACCCAGATTGGGAGTTTTGGCAGGACACCTCTGATCCTTTTTTGGTCTCTTCAAGAGACCAAATTAATGGAGACCCTTTTGATGATTATCTTTGCTTCGATATGGTTGACAGGGAAGCAAATCAAGTGCCGCTGAGTTGGGAAGCCATGGAAGCAAATAAGACTGAGGAGGAGAAAACATACATAGGTGTGAGGAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGCACCAGAGTTTGGCTTGGAACGTTCGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACAACGCTGTTCTTAATTTTCCAGTGCAAAAGGTGAAGGAGTCTCTGCAACACATCAGGTATGGTTGCGGCAAAGGCTGTTCGCCTGCTTTAGCAGTCAAGGAGAGGCACTATATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAGCCAAACAGCAATCATCAGAGCTGGTGGTGCTAGAGGACTTGGGTGTTGACTATCTGGAGCAACTTCTCACCATATCCGATCAGACTACAATCTAG 606 0.4653 MSFPSYQQPYPDWEFWQDTSDPFLVSSRDQINGDPFDDYLCFDMVDREANQVPLSWEAMEANKTEEEKTYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLQHIRYGCGKGCSPALAVKERHYIQRKLSSKAKKGKAKQQSSELVVLEDLGVDYLEQLLTISDQTTI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01995 201 SUPERFAMILY DNA-binding domain 69 128 IPR016177 GO:0003677
Accr2g01995 201 CDD AP2 70 129 IPR001471 GO:0003700|GO:0006355
Accr2g01995 201 FunFam Ethylene-responsive transcription factor 2 68 129 - -
Accr2g01995 201 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Accr2g01995 201 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Accr2g01995 201 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
Accr2g01995 201 PANTHER DNA-BINDING DOMAIN 59 193 IPR044808 GO:0003700|GO:0009873
Accr2g01995 201 Gene3D AP2/ERF domain 68 129 IPR036955 GO:0003700|GO:0006355
Accr2g01995 201 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
Accr2g01995 201 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01995 Accr-Chr2 54586902 54587507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01995 45 199 AP2-EREBP Transcription Factor Family AT3G23240 52.201 9.67e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g01995 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01995 K14516 - gmx:100527364 220.32