Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01992 ATGGAACAGTCGCCAAAGAAAACGGGAAAGGAGGATGAACCAAAAGGAAGCAAATACAGAGGAGTACGAAGGCGGCCGTGGGGGAAATTCGCGGCGGAGATTCGAGATTCGAACCGGCACGGGGCTCGAGTGTGGCTGGGCACTTTCAACACGGCGGAAGAAGCAGCGAGAGCCTACGATCGGGCTGCTTTTGGGATGAGAGGGCCTTCGGCGATTCTCAACTTCCCGGAAGAATATGGTCTTAGCAATGTGAGGAGTGGAAGTTGCAGTAGCAGCCACTTGCATCGGTCTTCTTCTTCTTCGTCGTCGTCGTCTTCAATGGCGGCGGAAGCTCAGGGAGGAAGACAGGTGTTCGAGTTCGAGTGTTTCGATGATCAATTGTTGGAGGATCTTCTTGATAATGCGACCAGGAAGGAGCAAGAGTAA 426 0.5305 MEQSPKKTGKEDEPKGSKYRGVRRRPWGKFAAEIRDSNRHGARVWLGTFNTAEEAARAYDRAAFGMRGPSAILNFPEEYGLSNVRSGSCSSSHLHRSSSSSSSSSSMAAEAQGGRQVFEFECFDDQLLEDLLDNATRKEQE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01992 141 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Accr2g01992 141 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Accr2g01992 141 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Accr2g01992 141 PANTHER DNA-BINDING DOMAIN 8 132 IPR044808 GO:0003700|GO:0009873
Accr2g01992 141 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Accr2g01992 141 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Accr2g01992 141 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Accr2g01992 141 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Accr2g01992 141 MobiDBLite consensus disorder prediction 84 110 - -
Accr2g01992 141 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Accr2g01992 141 Coils Coil 132 141 - -
Accr2g01992 141 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Accr2g01992 141 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01992 Accr-Chr2 54487339 54487764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01992 15 138 AP2-EREBP Transcription Factor Family AT3G23230 61.290 2.60e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g01992 AP2 7.8e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01992 - - qsu:111996183 147.517