Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01980 ATGAGTTCCTCTGAGGCCAAGCCTTTGCCCTTTAAGTCTAAGAAGCCCCATATCTGTCATTCAGCCTCCAAATCCCAATCACCTGATCCCATTTCATTGAACTCGAAAACTCCAGAGAAGGCGTCACAGCTCTCACGCCGTACCCGAAACCGCGGTGTTGCTCTCTCCATTAGAGAAGTCAGGAAAGCCGCTGAAAGCCTCCAAGAACAGAAAGGCCAGCGACAAAATCATGATCGTACGGACCATATAAAGTCCGCTCGAAGGAAGATTGCACCTTCTTTCGCAGAAATCTCCCCCCGCAAATCCAAGGCACCTATGGATGCGCACGTCAAGCTGCCGGAGAAGTACGAAATTTTGGGTGAGTTCTTTGACAGCTTGGATAGCTCGATCCGATTGTTGCATTTGAAAGGTTCCTCAACTACTTTCACGAATGTCTGCCCCAAAATTGAATGTTTAACTGACAGGAGATTTACGCATAGTCATCTGGCCCAGTTGAAATATATCTTTCCCGAGGCGCTTGTTGTAAAGAAGGTGCTCAGGTTTGATGAACGAACAAGTTGTATGAAGCCAGACCTCCATCTTACATTAAATCCCGATTCAATGCTGCTTTCTGAAGGTGGAAGTGTGTCCTTGAGAAAGTTATTTCGCACACGGTTAAGAGATTTTTATGAATCACATCCTGAGGTTGATGAAATTCCAGAAGAAATACTGCCCGAGCCATTCAATAACCGTAAGCAAGATCGTCCTTTAAAAACATTGGGAACTACCTCCTCGTCATTTGTTATAATACCATCAAATGGTGCAGTTGCACCTCATCTTCCGGCTGGAGAACCTGTATGCATGCAAGATAATGCCATGGTAATCAATTCAGAGCCTACTGAGGGAGACGGAAACTCGGAAGTGCCTGTTAACAGGTCAATAGTAGCACATCATCAACAACCAGCAGTAGCCACTCATATGTCTCGATCTTTCAGAAGGCGCTTTTCTCAGATATCAGTAAAAGACGAAGCAGATGATGTGCAACAAAAGTCACCATCAGGCTCATTACCTCCTCAATCTGTCCCAGTTTCAGAATCAAGCATGAAGACAAATTCATCAAGTGTAGATACTACTATGTGCCCAACAATATGTGCTTCTCCAGCTAAGCCTGAATCATCTGGTGTTTCGGTTTCCACTCCAAATAAAGTTATGTCTACTCCATCTAGATTGATGACTCATACACCTTCACTGCTTACCCCTAAGAGATGTTACATGAGCCCCGATGACAGCTCTTGCAGCTCACCAAACAAGTTGGTTAGGCGTGCAACTAGTTTGAAGAAGTCATTGAACTTTGACACTCCAGTTAAAAATCGCATGACAGAGAATGAAGCTGGTGGCTTATCAACTGATGATGATATTTTTGATATTCTACCGGAGAGTCTTCTCCAATCGATTAAAGAAAGGGAGAGGGTGGCGATGGAGGAAAGAAATCCGGCTATCGCACAAGCAAAAAGACGTCAAAAAATGATCGCCTGCCTGCCGAAGCTATTTAACATGATTCATCTCTTGATTCATTCAATGAATCGTTCTGTTGTCACAAAAGCGGAGCTTCTAAGCAAGATAATCTCAAACCACTGTGATATTGTTGACCGGAGAGAAGTTGAAGAACAGCTGAATTTGTTGCTAGAACTAGTTCCAGAATGGATCTCTGAAAAGTTGGCATCTAGTGGAGATCTGCTATTCTGCATAAATAAAATGCAGGACCCTGAGACCATTCGATCACAGCTTGCAGAAGCAAAGTGA 1782 0.4383 MSSSEAKPLPFKSKKPHICHSASKSQSPDPISLNSKTPEKASQLSRRTRNRGVALSIREVRKAAESLQEQKGQRQNHDRTDHIKSARRKIAPSFAEISPRKSKAPMDAHVKLPEKYEILGEFFDSLDSSIRLLHLKGSSTTFTNVCPKIECLTDRRFTHSHLAQLKYIFPEALVVKKVLRFDERTSCMKPDLHLTLNPDSMLLSEGGSVSLRKLFRTRLRDFYESHPEVDEIPEEILPEPFNNRKQDRPLKTLGTTSSSFVIIPSNGAVAPHLPAGEPVCMQDNAMVINSEPTEGDGNSEVPVNRSIVAHHQQPAVATHMSRSFRRRFSQISVKDEADDVQQKSPSGSLPPQSVPVSESSMKTNSSSVDTTMCPTICASPAKPESSGVSVSTPNKVMSTPSRLMTHTPSLLTPKRCYMSPDDSSCSSPNKLVRRATSLKKSLNFDTPVKNRMTENEAGGLSTDDDIFDILPESLLQSIKERERVAMEERNPAIAQAKRRQKMIACLPKLFNMIHLLIHSMNRSVVTKAELLSKIISNHCDIVDRREVEEQLNLLLELVPEWISEKLASSGDLLFCINKMQDPETIRSQLAEAK 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01980 593 SMART CDT1_2 112 239 IPR014939 -
Accr2g01980 593 MobiDBLite consensus disorder prediction 1 84 - -
Accr2g01980 593 Gene3D - 463 593 IPR038090 -
Accr2g01980 593 CDD Cdt1_m 111 250 IPR014939 -
Accr2g01980 593 PANTHER DNA REPLICATION FACTOR CDT1 19 593 IPR045173 GO:0003677|GO:0030174|GO:0071163
Accr2g01980 593 MobiDBLite consensus disorder prediction 342 374 - -
Accr2g01980 593 Pfam DNA replication factor CDT1 like 112 198 IPR014939 -
Accr2g01980 593 Pfam DNA replication factor Cdt1 C-terminal domain 473 565 IPR032054 -
Accr2g01980 593 MobiDBLite consensus disorder prediction 335 429 - -
Accr2g01980 593 FunFam CDT1-like protein a chloroplastic 463 593 - -
Accr2g01980 593 CDD Cdt1_c 469 590 IPR032054 -
Accr2g01980 593 MobiDBLite consensus disorder prediction 42 84 - -
Accr2g01980 593 SUPERFAMILY "Winged helix" DNA-binding domain 108 241 IPR036390 -
Accr2g01980 593 MobiDBLite consensus disorder prediction 20 41 - -
Accr2g01980 593 MobiDBLite consensus disorder prediction 382 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01980 Accr-Chr2 54362648 54365570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01980 83 592 Core DNA Replication Machinery Family AT3G54710 36.298 8.14e-88 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01980 K10727 - qsa:O6P43_006919 587.8