Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01978 ATGGGTACCAACTTGCAGCAAGTACTCAGAAGCCTCTGTTTCAACTCTGATTGGAAGTACGCCATCTTTTGGAAACTCAAACATCATGCTCGCATGATCTTGACATGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCTTTAGAGAATAACCCCAGCCAGAAGGCCTTGGAACAGGTTGATGGTGGTCAATTCTCACATGACCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTATTACTGGAAAACATCAGTGGATCTGTGCAGGTAATCAGGTTGCAGGTCCTGGCTCATCATATGAGTTCATTGATGAATGGCAATCCCAGTTTTCTGCTGGAATCAAGACCATTGTTGTTGTAGCTGTAGTTCCACTTGGAGTTGTTCAACTTGGCTCATTAAATAATCAGGTGATAGAAGATACAGAGTTTGTAACTCATATCAGAAATCTTTTTCTGGCTGCTAAGCATTACACAATAGGCCATTCTCTTGATCAAATACAAAGTGGTGCAAAGAATGTCTCACCTCTGGATGTGGAGAATATCAGAAAGAGTGAGACACTGAATAATTCGATGTCCTTCCCATGTTCTGAAAAGAGCTTTTCACGTTCTTGTGTTACTCAGGAAATGGCTGTTGATATGGCCAAGCATGGGGGCTCGGAGTTTAACTTTGATGAAAGTTACATTTTACTTCAGTCAATGTCAAATTTGATGGATCTGGAAGATCAGAAATTCTTGGAGATGAAATCTCTAAACAAGAAAGAGTATGAAGTGGGCAGTGGTGGCTGCAAATACATGAGGGTGGAATCAGAAAAAAATTTGTCATCCTTGGCACTCAATTCTGTTTCAAATGATAATAGCCTCCGAGATTTAATATATCCATCAGAAAAGGTTGCAGCTCATTCTGCCGGCATCCCTGCAGACTTTGTCCAAGATTTAATATGTCCATCAGAAAAGGGCACACTGAAGTCAGAGTTTCAGGCTGATCCTTGTTACAAGGATGTCCCATTCACAATGTTAAAGTTCCCTGCTGGCTGTGAGCTGCATGAAGCGCTTGGACCAGCTTTTCTGAAACGGAGTAAATACTGTGATTGGGGGGCATGGGTGAATCAAGATGTTAAAACTGCAGAGATGCCAGATGAGATTAGCTGCAGCCAGCTGACTTCAGAATCTCGTCAAGAACATCTTTTGGAGGCAGTAGTGTCCAATATTCACCACAGTAATAATGATGCAAATAGTGACTACTCGTTTTGTACATCAGAGCAGTCTGGCATAGCATCTGGAAGAAATCCTGAAGCTTCTATTCACACCAGGCGCACTATTAATTCGGAATATTATTCTATAGATCAATCCTCTCTTATCAGAGAAGACAAACAGTCCTGTTTGAGTTCATCTGGAATCTGTGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCAGGTCCTAGTTCATGTAGTGAACGGTTTGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGCCTAGGGCAGGGGAATCTTGTAGGCCAAGGCCAAGGGACAGACAACTGATTCAAGATCGTATTAAGGAGTTGAGAGAGCTAGTGCCAAATGGAGCAAAGTGCAGTATTGATTCGCTGCTGGAGCGCACTATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGATAAGCTAAACAAATTCGCAGACTCTAAGACAAAGGTTTTGCAGGTACACCGCATGGAAGCAGATGTTCTTGGATCATCTGGCTATGAACAAGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAACAAGAATGGGCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACACATTTTCTAGAGATAGCAGAAGCCATAAGAAGCTTGGGTCTGACAATTTTGACAGGTGCAACAGAAGCTCATGGTGAGAAGACATGGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAACTGTACACAGATTGGATATATTATGGCCACTCGTGCAAATACTGCAATCCCAGAGTTCTATGTATTCACAATGA 2118 0.423 MGTNLQQVLRSLCFNSDWKYAIFWKLKHHARMILTWEDGYYDNPDEHDSLENNPSQKALEQVDGGQFSHDPLGLAVAKMSYRVYTLGEGIVGQVAITGKHQWICAGNQVAGPGSSYEFIDEWQSQFSAGIKTIVVVAVVPLGVVQLGSLNNQVIEDTEFVTHIRNLFLAAKHYTIGHSLDQIQSGAKNVSPLDVENIRKSETLNNSMSFPCSEKSFSRSCVTQEMAVDMAKHGGSEFNFDESYILLQSMSNLMDLEDQKFLEMKSLNKKEYEVGSGGCKYMRVESEKNLSSLALNSVSNDNSLRDLIYPSEKVAAHSAGIPADFVQDLICPSEKGTLKSEFQADPCYKDVPFTMLKFPAGCELHEALGPAFLKRSKYCDWGAWVNQDVKTAEMPDEISCSQLTSESRQEHLLEAVVSNIHHSNNDANSDYSFCTSEQSGIASGRNPEASIHTRRTINSEYYSIDQSSLIREDKQSCLSSSGICGVISPKGFSSAGPSSCSERFERSSEPAKNKKRPRAGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFADSKTKVLQVHRMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAEAIRSLGLTILTGATEAHGEKTWICFVVEGQNNRTVHRLDILWPLVQILQSQSSMYSQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01978 705 MobiDBLite consensus disorder prediction 490 528 - -
Accr2g01978 705 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 529 572 IPR036638 GO:0046983
Accr2g01978 705 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Accr2g01978 705 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 516 565 IPR011598 GO:0046983
Accr2g01978 705 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 702 IPR043561 GO:0003700|GO:0006355
Accr2g01978 705 MobiDBLite consensus disorder prediction 504 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01978 Accr-Chr2 54343855 54349212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01978 359 701 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 50.829 2.88e-90 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01978 - - ccaj:109796613 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01978 2 54343855 54349212 Accr5g02472 5 51051734 51057206 CCT
Accr2g01978 2 54343855 54349212 Accr2g01978 2 54343855 54349212 ECH