Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01975 ATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGCTGTGTATTTGCACCTTACTTTTGCCATGAACAAGGAGCTACTCATTTTGCAGCCATTCATAAGGTTTTTGGTGCAAGCAACGTCTCTAAGCTTCTTGCTCATCTCCCTGTAAGTGACCGTTGTGAAGCAGCAGTTACCATCTCATATGAAGCTCAAGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCCCATATCTTCTCCCTTCAACAACAGGTGGTTAATTTACAGGCTCAGCTAGCTTATCTGAGGGAACAAGCTGCTCAGAGCAATATTTTGAATGTCTCTGTCCCTGAAAACCCTAATAAACTAGCTGCTTTCTCTGATCACGATCTTCAAAAGTGGTTTCAGCCGGAGAATTCAAACACAGGAGGGACTCAATTTCTTCCCACCTCGTCTGATATGAATTCTTTTGCAACACAGTGCTATGGAAATTATACAAGTACCTTTGTGAATCCAAACACTATTACTGAAGAAAGTGGTTCATTTTCGAGCTTTCATGATCAGGATCAGACCAATTGTAACTCGGTGTCTTTTGACAATATGCAAGCAACAAGCAGTAGGCAGTGGGGCTTTCATGAAGTGGACGATCTTCAGTCTGTGGCTTTTGGTTACAGTGGATGA 687 0.4294 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFSLQQQVVNLQAQLAYLREQAAQSNILNVSVPENPNKLAAFSDHDLQKWFQPENSNTGGTQFLPTSSDMNSFATQCYGNYTSTFVNPNTITEESGSFSSFHDQDQTNCNSVSFDNMQATSSRQWGFHEVDDLQSVAFGYSG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01975 228 Coils Coil 87 107 - -
Accr2g01975 228 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Accr2g01975 228 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 201 - -
Accr2g01975 228 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01975 Accr-Chr2 54300757 54301673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01975 7 213 AS2 family AT3G58190 55.140 6.09e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr2g01975 LOB 5.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01975 K13945 - gmx:100776678 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01975 2 54300757 54301673 Accr2g01975 2 54300757 54301673 ECH