Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01974 ATGGTGATAAATGATTGTGAATTGCACAAGAGCCAGAAACAACCAAAACAACATTACCTCAGAAACCACAAGAACCCCAAAATCAAACGCCTCCCAAAAATTATTAAGAAGATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGCTGTGTATTTGCACCTTACTTTTGCCATGAACAAGGAGCTACTCATTTTGCAGCCATTCATAAGGTTTTTGGTGCAAGCAACGTCTCTAAGCTTCTTGCTCATCTCCCTGTAAGTGACCGTTGTGAAGCAGCAGTTACCATCTCATATGAAGCTCAAGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCCCATATCTTCTCCCTTCAACAACAGGTGGTTAATTTACAGGCTCAGCTAGCTTATCTGAGGGAACAAGCTGCTCAGAGCAATATTTTGAATGTCTCTGTCCCTGAAAACCCTAATAAACTAGCTGCTTTCTCTGATCACGATCTTCAAAAGTGGTTTCAGCCGGAGAATTCAAACACAGGAGGGACTCAATTTCTTCCCACCTCGTCTGATATGAATTCTTTTGCAACACAGTGCTATGGAAATTATACAAGTACCTTTGTGAATCCAAACACTATTACTGAAGAAAGTGGTTCATTTTCGAGCTTTCATGATCAGGATCAGACCAATTGTAACTCGGTGTCTTTTGACAATATGCAAGCAACAAGCAGTAGGCAGTGGGGCTTTCATGAAGTGGACGATCTTCAGTCTGTGGCTTTTGGTTACAGTGGATGA 798 0.4211 MVINDCELHKSQKQPKQHYLRNHKNPKIKRLPKIIKKMTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFSLQQQVVNLQAQLAYLREQAAQSNILNVSVPENPNKLAAFSDHDLQKWFQPENSNTGGTQFLPTSSDMNSFATQCYGNYTSTFVNPNTITEESGSFSSFHDQDQTNCNSVSFDNMQATSSRQWGFHEVDDLQSVAFGYSG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01974 265 Coils Coil 124 144 - -
Accr2g01974 265 PANTHER LOB DOMAIN CONTAINING PROTEIN 38 237 - -
Accr2g01974 265 Pfam Lateral organ boundaries (LOB) domain 44 141 IPR004883 -
Accr2g01974 265 ProSiteProfiles LOB domain profile. 43 145 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01974 Accr-Chr2 54300757 54301784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01974 44 250 AS2 family AT3G58190 55.140 5.11e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr2g01974 LOB 7.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01974 K13945 - gmx:100776678 292.737