Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g01968 | ATGGAGTTCAGGTACACAGAAGAGTCAAAGAGCTGGAGCGAAGAAAGTGGTGATGATCGATCGGAGCATAATGAAGAAAGGGGAATTAGTACAGGAAGATCATATGAGTGTGTGTTTTGCAAGAGAGGGTTCACCACAGCACAAGCCCTAGGTGGCCACATGAATATTCACAGGAAAGATAGAGCCAAGTCGACCAAACCCAGTTTTTCTGCTTCCACTTCAACCAAAATGATTGAAGACCACGAGATCGACCATGCAATTTCAAGTTTCCCACCTGGGAATTACTTTTCTTCTGAGGTAGATAACAACAGCAAGTATAATTCTAATTACCCTCCCTCCCAATTTGCTTTTCCTGCAGAACAGTACTGTGATCAGAGGGATCGGGACGTGTTTGGAGGAGATTATAATTGGATGACGGGTTTGAGTTTGTCTAGTGCTCCACTTTATGTGAGCGATAATAAAGAGAAGAGAAGAAGTAGCAGTGAAGAAGATGGTCTGGATTTGGAGCTTCGATTGGGTTATCATTCCTAA | 531 | 0.4313 | MEFRYTEESKSWSEESGDDRSEHNEERGISTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSTKPSFSASTSTKMIEDHEIDHAISSFPPGNYFSSEVDNNSKYNSNYPPSQFAFPAEQYCDQRDRDVFGGDYNWMTGLSLSSAPLYVSDNKEKRRSSSEEDGLDLELRLGYHS | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g01968 | 176 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 37 | 57 | IPR013087 | - | |
Accr2g01968 | 176 | Gene3D | Classic Zinc Finger | 8 | 89 | - | - | |
Accr2g01968 | 176 | Pfam | C2H2-type zinc finger | 35 | 59 | - | - | |
Accr2g01968 | 176 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 35 | 62 | IPR013087 | - | |
Accr2g01968 | 176 | PANTHER | OS07G0101800 PROTEIN | 6 | 175 | - | - | |
Accr2g01968 | 176 | SUPERFAMILY | beta-beta-alpha zinc fingers | 33 | 61 | IPR036236 | - | |
Accr2g01968 | 176 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g01968 | Accr-Chr2 | 54238920 | 54239450 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g01968 | 35 | 90 | C2H2 Transcription Factor Family | AT5G43540 | 51.786 | 1.55e-13 | 62.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Accr2g01968 | zf-C2H2_6 | 1.5e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g01968 | - | - | pcin:129296398 | 148.673 |