Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01968 ATGGAGTTCAGGTACACAGAAGAGTCAAAGAGCTGGAGCGAAGAAAGTGGTGATGATCGATCGGAGCATAATGAAGAAAGGGGAATTAGTACAGGAAGATCATATGAGTGTGTGTTTTGCAAGAGAGGGTTCACCACAGCACAAGCCCTAGGTGGCCACATGAATATTCACAGGAAAGATAGAGCCAAGTCGACCAAACCCAGTTTTTCTGCTTCCACTTCAACCAAAATGATTGAAGACCACGAGATCGACCATGCAATTTCAAGTTTCCCACCTGGGAATTACTTTTCTTCTGAGGTAGATAACAACAGCAAGTATAATTCTAATTACCCTCCCTCCCAATTTGCTTTTCCTGCAGAACAGTACTGTGATCAGAGGGATCGGGACGTGTTTGGAGGAGATTATAATTGGATGACGGGTTTGAGTTTGTCTAGTGCTCCACTTTATGTGAGCGATAATAAAGAGAAGAGAAGAAGTAGCAGTGAAGAAGATGGTCTGGATTTGGAGCTTCGATTGGGTTATCATTCCTAA 531 0.4313 MEFRYTEESKSWSEESGDDRSEHNEERGISTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSTKPSFSASTSTKMIEDHEIDHAISSFPPGNYFSSEVDNNSKYNSNYPPSQFAFPAEQYCDQRDRDVFGGDYNWMTGLSLSSAPLYVSDNKEKRRSSSEEDGLDLELRLGYHS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01968 176 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Accr2g01968 176 Gene3D Classic Zinc Finger 8 89 - -
Accr2g01968 176 Pfam C2H2-type zinc finger 35 59 - -
Accr2g01968 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Accr2g01968 176 PANTHER OS07G0101800 PROTEIN 6 175 - -
Accr2g01968 176 SUPERFAMILY beta-beta-alpha zinc fingers 33 61 IPR036236 -
Accr2g01968 176 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01968 Accr-Chr2 54238920 54239450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01968 35 90 C2H2 Transcription Factor Family AT5G43540 51.786 1.55e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g01968 zf-C2H2_6 1.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01968 - - pcin:129296398 148.673