Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01961 ATGGCCGTCGACGCCCTTCAACTTCCTCGTGATTCTCTCCCCGATCCTCCCCCTCTCCCTCCCAAGTCCCACCTTTTCGCCGCTCCCGCCTCTAAGGAGGTGCATTTCAGAGGCGTCCGTAAGCGTCCCTGGGGCCGATTCGCCGCCGAGATCCGCGATCCCTGGAAGAAGACACGCAAATGGCTTGGCACCTTTGATACCGCTGAGGAGGCGGCTCGGGCCTACGATGAGGCTGCCAGGACTCTTCGTGGACCCAGGGCTAAGACTAACTTCGTTTATGCCCCTCTTCCCGTCCCTCCCTTGGTTCCGATGCTGCCGACCAACTCCTCTTTTTCTCCTGCCGCTCATCCTGATGGTGTAGAGATGTTCCGGAGGCGCCTGGAGTTTTGGAGGCCTCCGGCGTATTATGCGCCGGACGCCACCACAGGACTGCCGCTGAGATCGGAGTACAAGGGATACAGGCTGGAGAATGTGGATATGGTGGTGGGCGAGAAGAGAAACATGCGGACAGAGAAGAAACCGCTGATGATCGATCTTAACCAACCACCACCCTTGTTCTGA 561 0.5865 MAVDALQLPRDSLPDPPPLPPKSHLFAAPASKEVHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARTLRGPRAKTNFVYAPLPVPPLVPMLPTNSSFSPAAHPDGVEMFRRRLEFWRPPAYYAPDATTGLPLRSEYKGYRLENVDMVVGEKRNMRTEKKPLMIDLNQPPPLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01961 186 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Accr2g01961 186 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Accr2g01961 186 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Accr2g01961 186 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Accr2g01961 186 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g01961 186 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Accr2g01961 186 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 30 115 - -
Accr2g01961 186 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Accr2g01961 186 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Accr2g01961 186 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Accr2g01961 186 FunFam Ethylene-responsive transcription factor 2 34 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01961 Accr-Chr2 54043232 54043792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01961 32 185 AP2-EREBP Transcription Factor Family AT5G44210 45.930 1.36e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g01961 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01961 K09286 - qsa:O6P43_006945 208.764