Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01960 ATGGAAGAGGTTGAAGAAGCGAACAGAGCAGCTGTTGGAAGCTGTCATAAGGTTCTTAGCTTGTTGTCCCATCCCCAAGATCAAGTTCAGCATAGGAACTTAATGCTAGAAACTGGGGAGGCTGTGGGAAAGTTCAAGAAAGTTGTTTCTCTGCTCGGTAACGGTCTGGGTCATGCAAGAGTCAGGAAACTCAAAAGAGTTCAAATTCCTATTCCTGAAAGCTTGCTCTTAGACAACCCTAATTGCAGAACAAATTATCAATCAAAAAATTTGCAATTTCCCCAAAACAGCTTTAGGGACGAGTCGATTCAGGAATTGAGAAATTCACTCTCCCTGGGAAATCCATCATTGGAATTGAGCTCAAGTGGGAAAAGTCCTCTCCAACTTACCCAACAAGCATCTGCACAGCACTATCACTTCCTTCAGCAGCAGCAGCAAAGGTTATTACTCCAGCATCATCAACAACAGATGAAACACCAAGCAGATTTGATGTATCAAAGGAACAATAGTGGCATGAATCTGAATTTTGATAGCTCTAGCTGTACACCTACAATGTCATCAACTAGGTCTTTTATTTCTTCCTTGAGCATGGATCGAAGCGTAGCTAACATGGATGGAAGTGCCTTTCATTTAATTGGTGCTCCTCTCTCTTCGGATCAGAATTCACTACAGCATAAAAGAAAGTGTTCTGGCAGAGATGAGGGCAGCGTCAAGTGTTCGAGCAGCAGTACCAGGTGCCACTGCTCAAAGAAGAGGAAACACAGAGTAAAGAGATCAATCAAGGTTCCTGCTATCAGCAACAAGCTTGCTGATATACCCCCCGATGATTATTCATGGAGAAAGTACGGGCAGAAGCCAATTAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGTTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGACTCTTCCATGCTAATTGTTACCTATGAAGGCGAGCATAACCACCCTAAAATACCAACACAATCCGCAAATGCATGA 1026 0.4396 MEEVEEANRAAVGSCHKVLSLLSHPQDQVQHRNLMLETGEAVGKFKKVVSLLGNGLGHARVRKLKRVQIPIPESLLLDNPNCRTNYQSKNLQFPQNSFRDESIQELRNSLSLGNPSLELSSSGKSPLQLTQQASAQHYHFLQQQQQRLLLQHHQQQMKHQADLMYQRNNSGMNLNFDSSSCTPTMSSTRSFISSLSMDRSVANMDGSAFHLIGAPLSSDQNSLQHKRKCSGRDEGSVKCSSSSTRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDSSMLIVTYEGEHNHPKIPTQSANA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01960 341 FunFam WRKY transcription factor 65 257 334 - -
Accr2g01960 341 Pfam WRKY DNA -binding domain 275 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g01960 341 ProSiteProfiles WRKY domain profile. 268 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g01960 341 MobiDBLite consensus disorder prediction 220 243 - -
Accr2g01960 341 Pfam Plant zinc cluster domain 226 271 IPR018872 -
Accr2g01960 341 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 338 IPR044810 GO:0003700
Accr2g01960 341 SMART WRKY_cls 273 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g01960 341 SUPERFAMILY WRKY DNA-binding domain 271 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g01960 341 Gene3D WRKY domain 259 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01960 Accr-Chr2 54036222 54038047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01960 1 338 WRKY Transcription Factor Family AT2G30590 54.881 3.48e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr2g01960 WRKY 4.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01960 - - gmx:100170681 538.495