Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01949 ATGGACATGATAGGTGTGAAGAAGGAGAAGATGGGTTTCGAGGAAACAGAACTGAGGCTGGGATTGCCCGGAAATAATGGTGGCGCCACCGAATCGGAAGTGGCTAGAAAGAGAGGTTTCTCTGAGACTGAATCAGAGACTACTGTGGACTTGATGTTGAATCTCTCTTCTTCAAAGGAATCTGCAGATCCAACTGATACCCTCAAGAAGGAGAAGACCCTTCAGCCCACTGATCCTGCCAAGCCTCCCGCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGAGATCGTTCAGAAAGAACATATTGAAGAACAATAATGGAGAAGAGAAGGAGAAAGGAAGCCCTAATAATAATGGAAATTTCGTGAAAGTAAGCATGGATGGAGCTCCTTACCTTCGCAAAGTGGACCTCAAGTTGTACAACACTTACCAAGATCTCTATGATGCTCTTGCCAAAATGTTCAGCTCCTTCACCATTGGTAACTGTGGATCCCAAGGAATGAAGGACTTTATGAACGAGAGTAAGCTGATGAATCTCTTGAACAGCTCCGACTATGTCCCAACCTATGAAGACAAGGACGGCGACTGGATGCTTGTTGGAGACGTCCCTTGGGAGATGTTTGTTGAATCATGCAAGCGTTTGCGTATCATGAAAGGCAAGGAGGCTATCGGACTTGCGCCGAGGGCCATGGAGAAGTGCAAGAACAGAAGCTAG 714 0.4734 MDMIGVKKEKMGFEETELRLGLPGNNGGATESEVARKRGFSETESETTVDLMLNLSSSKESADPTDTLKKEKTLQPTDPAKPPAKAQVVGWPPVRSFRKNILKNNNGEEKEKGSPNNNGNFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFSSFTIGNCGSQGMKDFMNESKLMNLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01949 237 ProSiteProfiles PB1 domain profile. 119 219 IPR000270 GO:0005515
Accr2g01949 237 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 224 IPR003311 GO:0005634|GO:0006355
Accr2g01949 237 FunFam Auxin-responsive protein 114 229 - -
Accr2g01949 237 Gene3D - 114 231 - -
Accr2g01949 237 SUPERFAMILY CAD & PB1 domains 111 218 - -
Accr2g01949 237 Pfam AUX/IAA family 15 228 IPR033389 -
Accr2g01949 237 MobiDBLite consensus disorder prediction 17 88 - -
Accr2g01949 237 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01949 Accr-Chr2 53891348 53893420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01949 122 222 B3 DNA Binding Superfamily AT3G61830 31.683 1.77e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr2g01949 AUX_IAA 7.8e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01949 K14484 - qsu:112007559 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01949 2 53891348 53893420 Accr2g01949 2 53891348 53893420 ECH