Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01948 ATGAATTTTGAGGGTGAGCTCATGAATCTGAAGGACACAGAGCTGAGGTTGGGTTTGCCCGGAAGAGATGAGGAACAAGAAAAACGTTCATGCAGCGTCGTCAAGAGCAACAAGAGGTGTCGGCATGAATCAAGTGAGGAGGAGGGGTCATCGGTAACTGAGAAGAACAACGCCGGTGACGGTTCTGATGACCAAGACAACGTGCCTCCACCAGCAAAGGCACAAGTAGTGGGATGGCCACCCATTCGATCTTACAGGAAGAATTGTGTTCAACAACAAAACAATAAGGGATGTCAGGAGCGTAGTGATGGGGCTGAATATGTGAAAGTCAGCATGGATGGTGCTCCTTATCTCAGGAAGATACATCTCAGAGTTTATAACTGCTATCCACAGCTCCTCGAGGCCTTGCAGAACATGTTCAAGTGCACTTTCGGTGAATACTCAGAAAGGGAGGGATACAATGGATCTGAATACGCTCCGACTTACCAAGACAAAGATGGCGACTGGATGCTGGTTGGAGATGTTCCATGGAATATGTTCATATCATCTTGCAAGAGGCTGAGAATCATGAAAGGATCTGACGCTAAAGGATTGGGTGGTTGTTTATGA 609 0.4696 MNFEGELMNLKDTELRLGLPGRDEEQEKRSCSVVKSNKRCRHESSEEEGSSVTEKNNAGDGSDDQDNVPPPAKAQVVGWPPIRSYRKNCVQQQNNKGCQERSDGAEYVKVSMDGAPYLRKIHLRVYNCYPQLLEALQNMFKCTFGEYSEREGYNGSEYAPTYQDKDGDWMLVGDVPWNMFISSCKRLRIMKGSDAKGLGGCL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01948 202 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 196 IPR003311 GO:0005634|GO:0006355
Accr2g01948 202 MobiDBLite consensus disorder prediction 16 50 - -
Accr2g01948 202 Gene3D - 99 201 - -
Accr2g01948 202 ProSiteProfiles PB1 domain profile. 105 192 IPR000270 GO:0005515
Accr2g01948 202 FunFam Auxin-responsive protein 100 201 - -
Accr2g01948 202 MobiDBLite consensus disorder prediction 1 76 - -
Accr2g01948 202 Pfam AUX/IAA family 13 199 IPR033389 -
Accr2g01948 202 SUPERFAMILY CAD & PB1 domains 100 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01948 Accr-Chr2 53876806 53877733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01948 99 198 B3 DNA Binding Superfamily AT2G46530 31.000 1.57e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr2g01948 AUX_IAA 6.9e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01948 K14484 - gmx:100780752 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01948 2 53876806 53877733 Accr2g01948 2 53876806 53877733 ECH