Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01938 ATGAGTCAGAAAAAGAACCCTCTTGTGTTTCTAGACGTCTCAATTGATGGGGATCCTGTGCAAAGAATTGTTATTGAGCTTTTTGCCAGTATTGTTCCTAAGACAGCTGAAAATTTTCGGGCACTCTGCACAGGTGAGAAAGGCATTGGAAAATCAACTGGAAAGCCTTTGCATTACAGAGGAACCAGTTTCCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCTGATGAAAATTTTATATTAAAGCATGATGGACCTGGTCTTCTATCTATGGCTAATGGTGGTCCAAACACAAACGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTAGTTAGTGGATTGGATCTTCTGAAGAAAATTGAACTGGTGGGGACGTCAGATGGGAAACCTCTTCGGCCAGTTAAAATTATCGATTGTGGTGAAACCACTGAAGCGAAAATTCAGCCAAAAATTGGGAAAGAGAAAGGTGAAAAGAGAAAATCTGTTGAATCCTCAACTTCTAATGATAGTTCTGACAAAAAATCAAAAGGAAAAGGGAAGACGTCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCATCATCTGATTCATACAGCTCAAACAGTGATAGCTACTCTGTTTCTTCAGACTCTGACTCAGAATCATCACTTTCTGGCTCAAGTTCTTCCAGCTATGGTAAACATCGTAAGAGGAAACCTGTGAAAAGATCTAGGCACAAGCAGAGGAAGAAGAGAAGAAATGGACGAAAGCAAAAGAGAAGCCGGCATAGTAGACAATCTAGACGCAAGTCCAGATGGAGCTCAGAAGATTCAAGTGATACTGAAAGTGATAGTACTAGCGGTAGTGACAGCAGTTCTGATGATGAGAAAGCTCATCGCCATGTCTCTGGTCGTAAAGCACATGCTGAGAACAAACAGAAAAAAAATTTAGAAACTGGGAGTGGGAAGCAAGCTCCCAGCCCTCCTTTGTTTAGAACTGCTTCAGATCAGGGAGAGGATTCCAAGGTCAGAAGAACTGAAGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCTGAAAATTCCGAGTTTCTGAATAATGGGCATGATACTGAAGCCAAGTACAGTAAAGCTGCTAAGCAACCTACTCATTTGGATGATTCTAATGACGATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAGTTCCGATAGGAAGTTAGTTGAGCAAAACCGAGGAGGTGCTTTGTTGAGGAGTCCCCGCCAACCTGCTGCCTCCAAACATGGTCAGGGTGTGTCAAAAATCCCTTCGCCAAATGGTGAACCAAAGCGTATTAGAAAAGGACGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTTACCCCATTCCTATCACCGTGGTGATAGAAATATAAGGAGAAACTTCGACAGGCATACAAGCTACAGAAACTACTCTGAGCGTTCACCACAGAGACGCTATGGAAGCCCTCCAAGGCGCAGGAGCCGTCCGAGATACCAAAGCAGAAGAAGCCGGAGTCGGAGCGTCTCTCACAGTCCAGTGCGTGGCCGTTTTAGGGACCGTGGTCGCAGCCAGAGTCCAACACGTAGCCCCACTCCAGATGGCAGGCGAGCTCCAATAAGTGATAGACTAAAATCCCGTCTTGGTCCTCAAAGTGTTCGGCACTCTCCAGACAGAGGAAGGGCCAGGTCCAATTCCAGGGATCATTTGTCACCCCCCAGATCCCCCGATGCCACCCCACCTAGGCGTCATGATAAAAGGACTTCTGTATCTCCAAGCAGGTCTAGATCTAGTTCATCTGGACAGAAGGGATTAGTTTCCTATGGAGAGGCCAGTCCTGATTCGGGGGCAAGGTAG 1983 0.4539 MSQKKNPLVFLDVSIDGDPVQRIVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVSGLDLLKKIELVGTSDGKPLRPVKIIDCGETTEAKIQPKIGKEKGEKRKSVESSTSNDSSDKKSKGKGKTSSKDLRKRRRYSSSDSYSSNSDSYSVSSDSDSESSLSGSSSSSYGKHRKRKPVKRSRHKQRKKRRNGRKQKRSRHSRQSRRKSRWSSEDSSDTESDSTSGSDSSSDDEKAHRHVSGRKAHAENKQKKNLETGSGKQAPSPPLFRTASDQGEDSKVRRTEDKQSHEEGELSPENSEFLNNGHDTEAKYSKAAKQPTHLDDSNDDRGASPRRSDAMSSDRKLVEQNRGGALLRSPRQPAASKHGQGVSKIPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRLPHSYHRGDRNIRRNFDRHTSYRNYSERSPQRRYGSPPRRRSRPRYQSRRSRSRSVSHSPVRGRFRDRGRSQSPTRSPTPDGRRAPISDRLKSRLGPQSVRHSPDRGRARSNSRDHLSPPRSPDATPPRRHDKRTSVSPSRSRSSSSGQKGLVSYGEASPDSGAR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01938 660 MobiDBLite consensus disorder prediction 316 343 - -
Accr2g01938 660 CDD cyclophilin_ABH_like 7 173 - -
Accr2g01938 660 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 MobiDBLite consensus disorder prediction 180 660 - -
Accr2g01938 660 MobiDBLite consensus disorder prediction 180 212 - -
Accr2g01938 660 Gene3D - 1 181 IPR029000 -
Accr2g01938 660 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Accr2g01938 660 MobiDBLite consensus disorder prediction 258 295 - -
Accr2g01938 660 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Accr2g01938 660 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Accr2g01938 660 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Accr2g01938 660 MobiDBLite consensus disorder prediction 634 648 - -
Accr2g01938 660 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Accr2g01938 660 MobiDBLite consensus disorder prediction 578 612 - -
Accr2g01938 660 MobiDBLite consensus disorder prediction 399 433 - -
Accr2g01938 660 MobiDBLite consensus disorder prediction 363 385 - -
Accr2g01938 660 MobiDBLite consensus disorder prediction 228 257 - -
Accr2g01938 660 MobiDBLite consensus disorder prediction 530 554 - -
Accr2g01938 660 MobiDBLite consensus disorder prediction 467 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01938 Accr-Chr2 53765310 53769933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01938 25 171 U-box Gene Family AT5G67530 48.993 1.06e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01938 K09566 - gmx:100791082 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01938 2 53765310 53769933 Accr2g01938 2 53765310 53769933 ECH