Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01931 ATGAATTATCCGTATACAATAAAAGAAGAGTACTTGGAACCATCTTCAACTGAATTAGGAGGTGAGCTGGCAATGATTCTACCTCCACAGCCAATGCAAGGACTTAATGAAACGGGACCACCTCCATTTCTCACGAAGACATTTGATATGGTGGACGACCCTTCAACCGATCACATAATCTCGTGGGGCAGAGGAGGATCAAGTTTTGTTGTTCGGGATCCATGTTCTTTGTCTACCAATCTCCTTCCCAGATTCTTCAAGCACAACAATTTCTCAAGCTTTGTTAGACAATTAAACACCTATGGTTTTAGAAAAATTGACCCAGACAGATGGGAGTTTTCAAACGAAGAATTCATAAGGGGCCACAAGCATCTACTGAGGAACATAAGAAGAAGGAGAGCACCTTCCTATCATGTTACTCCATCTTCCCAAGCACATGGTCAATGTGTTCAATTTGGTGGGTTTGGAGTAGAAGAAGAAATTCTACGTTTAAGGCGTGACAAGCAAGTGTTAATGATGGAGCTCGTGAAGCTTAGACAGCAACAACAGAACACCAGAGCCTACCTTCAGGCGATGGAACAGAGGTTACGAGGAACAGAAATAAAGCAGCAAAAAATGATGGCTTTTTTAGCTGGAGCATTGAAAAATCCAGCCTTTCTCCACCAACTACTTCAACAGAGTAATAGAAAGGAACTAGAAGAAGCCATGAGTAAGAAACGAAGGAGGTCAATTGATCAAGGACCAATTGATGTTGCTGAATCAAGCAGTGAAAGTGAGGGAAGGAATCATGTTAAAGTTGAAGTGTCTGAACTTGAAGTTCTAGCCATGGAAATGCAAGGTCTTGGTAGGGGTAAGAGAGAACAAGAAGCACTTGAATCGCCAGAGAGGCTGGAAAATGAACTTGATGAAGGATTTTGGGAAGAGTTTTTTAGTGAAAATGTTGAGGGTGAACTAGATATTCCAAGCAATGAAGGTGAAGAAGAAGATGAACATATAGTAGATATCAACGTCTTGGCCACGTGCTTAGGTTACATGGGTTCAAGTCCCAAGTGA 1053 0.4169 MNYPYTIKEEYLEPSSTELGGELAMILPPQPMQGLNETGPPPFLTKTFDMVDDPSTDHIISWGRGGSSFVVRDPCSLSTNLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFSNEEFIRGHKHLLRNIRRRRAPSYHVTPSSQAHGQCVQFGGFGVEEEILRLRRDKQVLMMELVKLRQQQQNTRAYLQAMEQRLRGTEIKQQKMMAFLAGALKNPAFLHQLLQQSNRKELEEAMSKKRRRSIDQGPIDVAESSSESEGRNHVKVEVSELEVLAMEMQGLGRGKREQEALESPERLENELDEGFWEEFFSENVEGELDIPSNEGEEEDEHIVDINVLATCLGYMGSSPK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01931 350 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 266 IPR027725 -
Accr2g01931 350 FunFam Heat shock transcription factor 1 36 133 - -
Accr2g01931 350 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01931 350 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Accr2g01931 350 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01931 350 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01931 350 Coils Coil 161 195 - -
Accr2g01931 350 MobiDBLite consensus disorder prediction 231 263 - -
Accr2g01931 350 MobiDBLite consensus disorder prediction 231 247 - -
Accr2g01931 350 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01931 350 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01931 350 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01931 350 Gene3D - 36 133 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01931 Accr-Chr2 53684279 53685422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01931 29 348 HSF AT3G22830 46.849 8.38e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr2g01931 HSF_DNA-bind 8.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01931 K09419 - gmx:100794264 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01931 2 53684279 53685422 Accr5g02518 5 51527137 51528960 CCT