Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01900 ATGGAGGTTCCTGTTTTGAAGGGTGAGGATTTGGCGCTTAAAACAGAGGCATCAAACTTGACAATTCAGGACAATCAGGTGAAGCCTGTTGTACAACAAGAAAGGGTCTTCGATTGGGATTCGAGTAACAATGAAAATATCAGTTTAGCCGAAAATGGGAGCAAGAGTGGTTTAAGCTGTGATGATTCGGTTGAAAGAGTTGACATCGGGATGGAAGTGAAGAAAAAAGATGATTTGAACGATCAGGTGCAGATTGGTGGTCGAGTATTGTCCTCAGTGTCCGAGGGAGCTGACAAGATATCTGATGATCAAGAGGCACTAAACTTGACGGTTGAGAATAAGGATGCGGAGCCAACTGTGCAACAAGAATGTGACTTAGATTGGGATAGGAGTAAGGGGGGAAATGTGGGTTGTGTCGACGACAGGAGCAAAATGAGTAGTTTAAGCTGTGATGATAGCATTAGAGGGGTTGACACTGAGGTGGAGGTGATGAAGAAAGCTTATTTGGATGATACAATGCAGATTAGTGGTCGAGTATTGCGCTCAGCGTCAAAGCGAGCGGTTAGTAAAATACCTGAGGGAGAGATTACTGAGAATGAGGAAATGAAGCCAAACCAACAACCACGTGACTTAGATTTGGATGTGAGCAAGAGTGGAATTGTTGGATTGACTAAGACCAGTATTAAAAGGAACACTTTAAGGCCTGGTCATTGCTTTGAAGGGCTTGATATTGAGATGGAGTTGAAGAAGAAAAGTAATGCAAATGATGAAGTGAAGACTAGTGGTCGAGTATTGCGCTCTATGTCAAAGAGAATAGACAGTAAGATATTTCATGGTGGAGAAGCTGATGAGATGCTGGCTGGGAAAAATGGAGAGAATGAACATGTTTGGTTTGAGAAAAATAAGGTTGAGGCAGAAAAGGAAGAAGGGGATTATTTTGTTAGTAGCAGTTATGAGAAGAAGAGAGTTGATGTGAAAATGGATGGCAATGAAAGAAGAAAGTTGAAACGGAAGCGTGGCAGACCCCCTAAATTGAAGATGGAAGAGCAAGATCAATCAGTTAGTAATATGCAGGGGAAATGTGGCAGTCCTCCGAAATTGAAGATGGAAGAGCAAGATCAACTTGTTGGTACTCTGCAACGAAAGCGTGGAAGGCCCCCCAAAATGAAGATGGAAGAGCAAGATCAATCAGTTGGTAATATGCAACAGAAACGTGGCAGACCTCCCAAAGTGAAGATGGAAGAGCAAGATCGACTAGTTGGTAACTTGCATCGGAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGCAAGATCAACTGGTTGGTAATATGCAACGGAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTAATATGCAACGGAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGAGCAAGATCAACTTCCTGGCAAAAAAAAGTCAAGTAAGCGTGGAAGGCCTCCCAAAAGTAGGCAGAAAATTAATCATCTGGAAGTAACACGAAACAGAAAACGAAAGAAGGGCTTTCGAAAAGGTAAGAAAGGTATAACTGTGAGAGACGGTACAAATATGAATGCAGTTGATGATATGTGCTTGAAAGTGGGATCTTGTGTAGAAGAGTCAAAAAAGAAGATATTGACTTCACCATTAACATCAAATTCTGCAAATCCTCTCATTAAGAAGAAAAAAGGATCTAATAAAGAGAAGCAGTTGGTGAGGCAACACATTTTGCAGCTGCTCTTGGCTGCAGGCTGGGTTGTTGATTACAGACCTAGGAATGGCAAAGAGTATAATGATGCAGTGTACGTTAGTCCGGATGGAAAGACTCACTGGTCAATTACCTTGGCCTACAAAAGGCTTCAGAAGCATTGTGAAGCTGGTGACGGTGAAGGTGAGGTGTACATTCCAGGTTTTAAATTTGTGCCCATATCATTTGAGGAATTCAATATTCTAACTAAGGTCATTAAAAAGAAAAGGAAAGGCAAAGATAAATTGAAGCAAACAGGAGGAAAAGATGGAGGCATAAATATGTCATTGAAGGGGAAAGTGAAGAGAAAAATAGCAATTGTTGAGGAGTACAATTTAGACAAAACATCACTCAAAAAGTTTCCAGCTCTGGCCAAGGATCGTAAACGGCAGAAAACACACAATAAGAAGCGAAGTGTTTTTATGGTTCGCAATGCTGAGGAGATGGATTCGGAAACTAATGGATACATACTTTACACTGGAAAGCGAACTGTGCTTGCTTGGATGATTGATTTGGGAACAGTCCTGCAAAATGAGAGGGTTCATTATGTGAACCAAAGAAGAGCTAGTGCAAAACTGGAGGGTAGGATCACAAGAGATGGAATTCATTGTGACTGCTGCAATGAAATTGTAACAATGTCAGAATTTGAAGCCCATGCAGGAAGCGAACTCTCTAATCCACTCAAAAATATACATATAGGGAAAGGAACTTCCCTTCTGCAATGCCTGCTGGACTCATGGAATAAACAAGATGAACTTGAAAGAAAAGGCTTCCATTTTATTGACACCACAAGTGAAGACCCTAATGATGAAGCATGTGGTGTCTGTGGAGATGGTGGAGACTTGATCTGTTGTGATAATTGCCCATCAACATTCCATCAAAGCTGCTTAAATATTAAAGAGTTCCCACCTGGCAACTGGCACTGCATTTATTGTTGTTGTAAATTTTGTGAGTTGGTAGATGGAAATACAAATGAAAGAGACGGCTACGATGACTTTACTACATCTGCTTTACTTACGTGCCATTTATGCGATCAAAAATATCATAGATCTTGTGTTGAGGTAAACGGTGTCCAAGTTGATGACTCTAGTTTTGCATTCTATTGTGGAAACAAATGTGAAGAGTTATCCAAGAGACTTGAAATGCTTCTTGGGGTTAAACATGACATTGAAGATGGACTTTCTTGGACTTTCGTTCGCCGGTCAGATCTTGGCTGTGATGCTTCTCAGATAGAATCTCAGATGGTTGAATGCAATTCCAAACTAGCTGTTGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATAATAGAAGTGGGATTAATCTCATCCACAGTATTCTTTATAATTGTGGTTCAAATTTTAATCGCCTGAACTATTCTGGTTTTATTACTGCTATCCTGGAGAGAGGCGACGAGGTCATTGGCGCAGCATCCATTAGGATCCGAGGGAACCAACTAGCAGAAATGCCATTCATTGGGACCCGTTATATGTATAGGCGCCAAGGAATGTGCCGCCGGCTTCTGAGTGCCATTGAATCGGCTCTTAGCTCTTTAAATGTTGAGTTATTGGTCATACCAGCAGTCTCAGAAGTCAAAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGTGACCAGGAAGAAAATGATAAAGAATTTCAATCTGTTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTAAAGTTGCTGATGAAGATCTGGTTCCTATAGAAGTTTTAAATCCTAAACTTCAGAAGAATCAAAGTACACTTGAGGAAGCAACTGACTGTGATGAGCCAAGTTCATTTAGGTCTGATTTAATCATTTCTGCCTCAGTGAATGACAGAGACGTAGTTGTTGAATCTGGTTCTTCTGATGAGACTGTGCGTCCTGATATATGTCCAAAAGACGTAAAATGTGAAGTTGGATGCCAATCTGTCAGTGATAATTTGACAGTGGAAGGCATGACTGCTTTAAAGGCAGATAATTATGATAGCGCGGCACATTTACAAGCTGAAGCGATCATCAATCATGATTGTGTCCAATCGCATCCCACAGGATCGAAAGAAATAAATTCTGAATCTATCAATGGCTGCGGTTCTCAGCAGAAACCCAGTGGTTATTGTACTTATGATGAAGCGAGTCTCGAGACCACTAAAGCTGATAAATCAGACGTGCGTATGGCAAAAGCAACCAATCTCCATAGTCTCGTACATTCTGGAGATTGCCAAAGATTACAGATAGCTTCTGGTTCCAGGGAGGATATCCCAAACGGTGCAAATGAGAAGAGTGAAGCAGCCAGCACAGCTGATGGGAACTCAGTTCTTAGTGATAAGGCCGGTATAAATCGGTCTTCAGAGTTACCTGAGGTTGATTTACAGGTCAATCAAACTGGACAGGGTGACGCTCCATCATTGTGTGGCGGCTCAAGCACTGGTTCCGGCATGGCTCTTCACTGTGCATCAGCTGGTGGTACTTCATGTGGTAATAGTACTGAAGTTGTGGTTCTGTCCAACGAAGCTGGTTAA 4332 0.4178 MEVPVLKGEDLALKTEASNLTIQDNQVKPVVQQERVFDWDSSNNENISLAENGSKSGLSCDDSVERVDIGMEVKKKDDLNDQVQIGGRVLSSVSEGADKISDDQEALNLTVENKDAEPTVQQECDLDWDRSKGGNVGCVDDRSKMSSLSCDDSIRGVDTEVEVMKKAYLDDTMQISGRVLRSASKRAVSKIPEGEITENEEMKPNQQPRDLDLDVSKSGIVGLTKTSIKRNTLRPGHCFEGLDIEMELKKKSNANDEVKTSGRVLRSMSKRIDSKIFHGGEADEMLAGKNGENEHVWFEKNKVEAEKEEGDYFVSSSYEKKRVDVKMDGNERRKLKRKRGRPPKLKMEEQDQSVSNMQGKCGSPPKLKMEEQDQLVGTLQRKRGRPPKMKMEEQDQSVGNMQQKRGRPPKVKMEEQDRLVGNLHRKRGRPPKVKMEEQDQLVGNMQRKRGRPPKVKMEEQDQLVGNMQRKRGRPFKVKMEEQDQLPGKKKSSKRGRPPKSRQKINHLEVTRNRKRKKGFRKGKKGITVRDGTNMNAVDDMCLKVGSCVEESKKKILTSPLTSNSANPLIKKKKGSNKEKQLVRQHILQLLLAAGWVVDYRPRNGKEYNDAVYVSPDGKTHWSITLAYKRLQKHCEAGDGEGEVYIPGFKFVPISFEEFNILTKVIKKKRKGKDKLKQTGGKDGGINMSLKGKVKRKIAIVEEYNLDKTSLKKFPALAKDRKRQKTHNKKRSVFMVRNAEEMDSETNGYILYTGKRTVLAWMIDLGTVLQNERVHYVNQRRASAKLEGRITRDGIHCDCCNEIVTMSEFEAHAGSELSNPLKNIHIGKGTSLLQCLLDSWNKQDELERKGFHFIDTTSEDPNDEACGVCGDGGDLICCDNCPSTFHQSCLNIKEFPPGNWHCIYCCCKFCELVDGNTNERDGYDDFTTSALLTCHLCDQKYHRSCVEVNGVQVDDSSFAFYCGNKCEELSKRLEMLLGVKHDIEDGLSWTFVRRSDLGCDASQIESQMVECNSKLAVALSVMDECFMPYIDNRSGINLIHSILYNCGSNFNRLNYSGFITAILERGDEVIGAASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLSAIESALSSLNVELLVIPAVSEVKDTWTSVFGFEPLEVTRKKMIKNFNLLVFPHVDMLMKEIKKPKVADEDLVPIEVLNPKLQKNQSTLEEATDCDEPSSFRSDLIISASVNDRDVVVESGSSDETVRPDICPKDVKCEVGCQSVSDNLTVEGMTALKADNYDSAAHLQAEAIINHDCVQSHPTGSKEINSESINGCGSQQKPSGYCTYDEASLETTKADKSDVRMAKATNLHSLVHSGDCQRLQIASGSREDIPNGANEKSEAASTADGNSVLSDKAGINRSSELPEVDLQVNQTGQGDAPSLCGGSSTGSGMALHCASAGGTSCGNSTEVVVLSNEAG 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01900 1443 MobiDBLite consensus disorder prediction 1353 1380 - -
Accr2g01900 1443 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1052 1146 IPR016181 -
Accr2g01900 1443 MobiDBLite consensus disorder prediction 326 531 - -
Accr2g01900 1443 SMART PHD_3 906 966 IPR001965 -
Accr2g01900 1443 SMART PHD_3 864 905 IPR001965 -
Accr2g01900 1443 MobiDBLite consensus disorder prediction 1285 1305 - -
Accr2g01900 1443 SUPERFAMILY FYVE/PHD zinc finger 854 906 IPR011011 -
Accr2g01900 1443 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1005 1165 IPR000182 GO:0016747
Accr2g01900 1443 PRINTS AT-hook-like domain signature 336 346 IPR017956 GO:0003677
Accr2g01900 1443 PRINTS AT-hook-like domain signature 444 454 IPR017956 GO:0003677
Accr2g01900 1443 PRINTS AT-hook-like domain signature 378 389 IPR017956 GO:0003677
Accr2g01900 1443 MobiDBLite consensus disorder prediction 473 490 - -
Accr2g01900 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 853 923 IPR013083 -
Accr2g01900 1443 ProSiteProfiles Zinc finger PHD-type profile. 862 907 IPR019787 -
Accr2g01900 1443 MobiDBLite consensus disorder prediction 451 466 - -
Accr2g01900 1443 MobiDBLite consensus disorder prediction 407 444 - -
Accr2g01900 1443 MobiDBLite consensus disorder prediction 1363 1380 - -
Accr2g01900 1443 SMART AT_hook_2 491 503 IPR017956 GO:0003677
Accr2g01900 1443 SMART AT_hook_2 336 348 IPR017956 GO:0003677
Accr2g01900 1443 SMART AT_hook_2 380 392 IPR017956 GO:0003677
Accr2g01900 1443 SMART AT_hook_2 402 414 IPR017956 GO:0003677
Accr2g01900 1443 SMART AT_hook_2 468 480 IPR017956 GO:0003677
Accr2g01900 1443 SMART AT_hook_2 424 436 IPR017956 GO:0003677
Accr2g01900 1443 SMART AT_hook_2 446 458 IPR017956 GO:0003677
Accr2g01900 1443 MobiDBLite consensus disorder prediction 508 523 - -
Accr2g01900 1443 CDD PHD2_CHD_II 865 904 - -
Accr2g01900 1443 CDD NAT_SF 1061 1120 - -
Accr2g01900 1443 PANTHER PHD FINGER PROTEIN 12 567 1304 IPR042163 GO:0003714|GO:0045892
Accr2g01900 1443 Pfam Tify domain binding domain 787 836 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01900 Accr-Chr2 53218190 53226855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01900 306 1172 PHD Transcription Factor Family AT5G36670 39.032 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01900 - - pcin:129313417 1962.96