Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g01889 | ATGGATCAGCCCCCATCCTCTGCTGTTAGACGCAGCTTGAAGCGCAAGCTCGAACAAGAATTCGAGGAAGATAGAGCAGACCAACAAAAGGCTGATCGTAAAGGGTTGGTTTTCGAACCTCAAAAGCCTCATCAGGATCTCTTGAGTGACGTTGTGTCGCAAGTCACTATTCTCAACTCTAGTTTCTCATCGTCTCAGTCGGATCGCCTCGCTGCCAAGCGTGCGGTTCATGTTCTCTGTGAACTCGCAAAGAATGAGGAACTTGTAAGTGGTATAGTGGGCTGTGGAGCTGTTCCTGCTTTGTTAAGACATCTGAAAGCACCAGAAACAGTTAGAGAAGGCGACGGTGGTCCCAAGCCTTACGAGCATGAGGTGGAAAAGGGATGTGCCTTTGTCCTTGGGCTTCTTGCTGTTAAACCAGAGCATCAACAACTCATTGTTGATGCTGGAGCTCTGCCCTGTCTCATGGATTTGTTAGAGAGGCACAAGACCCGGGTCAGTTCACGGGCACTTACTGGTCTTATAAGGAGAGCAGCTGATGCCATCTCAAACCTTGCGCACGAAAACAACACCATTAAAGCCCGTGTTGGGATGGAAGGTGGTATCCCTCCTCTTGTTGAATTGCTCAAATATAATGATGCAAAGGTACAAAAGGCATCTGCAGGGGCCTTACGAACTCTTGCATTTCAAAATGATGACAACAAATCTCAGATTGTTGGATGCAATGCACTGCCTACTCTTATACTAATGCTAGGATCAGAGGATGCTACAATACATTCTGAAGCAGTTGGCGTGATTGGAAATCTGGTTCACTCTTCTCCAAACATGAAGAGGGAAGTTCTTCAAGCTGGTGCTCTACAACCTGTAATTGGATTACTTAGATCTTGCTGTTCGGAGAGCCAAAGAGAAGCAGCTCTTTTAATCGGTCAATTTGCTGCAACGGATGCTGATTGCAAGGTTCACATTGCTCAAAGAGGGGCTATCCAGCCATTGATTGACATGCTCAGGACTCCTGATGCACAGCTTCGGGAAATGTCAGCTTTTGCACTTGGGAGACTGGCTCAGGACACACATAATCAAGCTGGTATTGCCTATCATGGAGGTATAGAGCCTCTACTCAACCTTCTTTGCTCTAAGAATGGACCTCTCCAACATAATGCAGCCTTTGCTCTATATGGTCTTGTTGATAATGAGGACAACGTTGCGGATATCGTTAAGCTTGGTGGTGTTCAAAAACTACAGGATGTAGATTTCAAAATTCAACCTTCCAGGGAGTGTGTAGAAAAAACAATGAAAAGGTTAGAGGAGAAAATGCATGGACGACAGGTGCTGGAACAACTTTTGTACCTTATGCGTTTTGGAGAAGAGGCTGTTCAAAGACGTGTAGCTCTGGCTCTTGCTCATTTTTGTGCCCCTGATGATCGGAAATTTATTTTTGTTGACAACAATGGAATTGAGTTCCTGCTGGATCTTCTAGAATCGACAAATACCAAACTGAAACGCGATGCTTCAATGGCACTTCACTCGCTGGCTGTCAAAACCACATCTGCCTCTTCCTTCGATGCTGCTCCTCCACCCCCAACTCCTCAGGTATACTTAGGCGAGCAATACGTAAACAATCCTACACTTTCTGATGTCACGTTTTTAGTTGAAGGCAAACGATTCTATGCGCACCGAATATGTTTACTTGCTTCCTCTGATGCGTTTTGTGCAATGTTTGATGGTGGTTACCGGGAAAGGGAAGCCAAAGATATAGAGATTCCTAACATTAAATGGGATGTCTTTGAGTTGATGATGAGATTTATTTACACAGGAACCGTATGTATCAATTTGGATGTTGCTCAGGACCTCTTAAGAGCTGCTGATCAGTATCTTTTAGATAGTCTTAAACGACACTGTGAATATGCAATTGCTCAGGATATTTCCGTGGAAAATGTTTCTCTTATGTACGAGTTATCTGAGACATTCAATGCAATGTCATTGAGGCAATCATGTATACTATTTTTATTGGAGCAATTTGACAAACTGAACGTCAAACCATGGTATTGCCGCATGATGCGTCGCATCATCCCAGCTATACATGAATTTTTCGGAAGCTTACTTACAAAGATTGCACAAGCAAAATCGTAA | 2130 | 0.4404 | MDQPPSSAVRRSLKRKLEQEFEEDRADQQKADRKGLVFEPQKPHQDLLSDVVSQVTILNSSFSSSQSDRLAAKRAVHVLCELAKNEELVSGIVGCGAVPALLRHLKAPETVREGDGGPKPYEHEVEKGCAFVLGLLAVKPEHQQLIVDAGALPCLMDLLERHKTRVSSRALTGLIRRAADAISNLAHENNTIKARVGMEGGIPPLVELLKYNDAKVQKASAGALRTLAFQNDDNKSQIVGCNALPTLILMLGSEDATIHSEAVGVIGNLVHSSPNMKREVLQAGALQPVIGLLRSCCSESQREAALLIGQFAATDADCKVHIAQRGAIQPLIDMLRTPDAQLREMSAFALGRLAQDTHNQAGIAYHGGIEPLLNLLCSKNGPLQHNAAFALYGLVDNEDNVADIVKLGGVQKLQDVDFKIQPSRECVEKTMKRLEEKMHGRQVLEQLLYLMRFGEEAVQRRVALALAHFCAPDDRKFIFVDNNGIEFLLDLLESTNTKLKRDASMALHSLAVKTTSASSFDAAPPPPTPQVYLGEQYVNNPTLSDVTFLVEGKRFYAHRICLLASSDAFCAMFDGGYREREAKDIEIPNIKWDVFELMMRFIYTGTVCINLDVAQDLLRAADQYLLDSLKRHCEYAIAQDISVENVSLMYELSETFNAMSLRQSCILFLLEQFDKLNVKPWYCRMMRRIIPAIHEFFGSLLTKIAQAKS | 709 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g01889 | 709 | SMART | BTB_4 | 544 | 641 | IPR000210 | GO:0005515 | |
Accr2g01889 | 709 | Gene3D | - | 45 | 174 | IPR011989 | - | |
Accr2g01889 | 709 | Pfam | BTB/POZ domain | 537 | 639 | IPR000210 | GO:0005515 | |
Accr2g01889 | 709 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 326 | 368 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 242 | 284 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | ProSiteProfiles | BTB domain profile. | 544 | 611 | IPR000210 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 139 | 187 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 189 | 229 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 356 | 396 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 273 | 313 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 472 | 512 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 85 | 138 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 315 | 355 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SMART | arm_5 | 231 | 271 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SUPERFAMILY | ARM repeat | 175 | 512 | IPR016024 | - | |
Accr2g01889 | 709 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Accr2g01889 | 709 | Gene3D | Potassium Channel Kv1.1; Chain A | 521 | 670 | IPR011333 | - | |
Accr2g01889 | 709 | SUPERFAMILY | POZ domain | 535 | 638 | IPR011333 | - | |
Accr2g01889 | 709 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 200 | 235 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | MobiDBLite | consensus disorder prediction | 9 | 34 | - | - | |
Accr2g01889 | 709 | Pfam | Armadillo/beta-catenin-like repeat | 231 | 270 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | Pfam | Armadillo/beta-catenin-like repeat | 196 | 228 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | SUPERFAMILY | ARM repeat | 64 | 166 | IPR016024 | - | |
Accr2g01889 | 709 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 367 | 409 | IPR000225 | GO:0005515 | |
Accr2g01889 | 709 | Gene3D | - | 298 | 519 | IPR011989 | - | |
Accr2g01889 | 709 | PANTHER | ARM REPEAT PROTEIN INTERACTING WITH ABF2 | 5 | 705 | IPR044282 | - | |
Accr2g01889 | 709 | Coils | Coil | 14 | 34 | - | - | |
Accr2g01889 | 709 | Gene3D | - | 175 | 297 | IPR011989 | - | |
Accr2g01889 | 709 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 150 | 200 | IPR000225 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g01889 | Accr-Chr2 | 53025118 | 53031334 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g01889 | 293 | 514 | U-box Gene Family | AT2G23140 | 25.328 | 2.15e-10 | 62.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Accr2g01889 | BTB | 1.6e-26 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g01889 | - | - | sind:105165291 | 1005.36 |