Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01870 ATGAATGGTGAAGAGGGGCGCAGAGATTTAAAAAGAAAGTTCCCACATGTGGACCGGTTGCAAGATCATGGATCTTATGATAGACTTCCTCCTGGTTGGTTGGGCTGCCCAGCATATGGTCAAGAAATAGGATGCATAATCCCTTCAAAGGTTCCGCTTGGTGAATCCTTTGATGATATCATTCCAAGTCAAAAATATTCTCCTAAGCAAGCTATTTTTCAACAAAGACATTTAGGTAGAGAAATTGGTCTAGTGATTGATTTGACAAATTCTACTCGTTACTACCCAATATCAGATTGGACCAAAGAAAAGATTCGTCATGTCAAGATAAGATGCAGAGGAAGAGATTCTGTGCCTGATGATGAATCTGTGAAAAGATTTTGCAATGAAGTCCAGGGTTTTCTCTCCCAAAGAACAAACACAAACAAATATATACTTGTGCATTGCACTCATGGACACAATCGCACTGGTTATATGATTGTTCATTTTCTTGTGCGAACAGAATCAATTTCAGTCACTGAGGCAATAAATAAATTTGCTACGGCACGTGACCCTGGAATTTACAAGCAGGATTATATTGATGCCTTGTACATGTTTTATCATGAAAGGAAGCCTGAAGAAGTTGTTTGTCCTCAAACTCCAGAGTGGAAGAGACTTTCTGATCCTGAGTTTCAATGTGCAGTTGACTCAGCTGTAGAAAATATTGGAGGTGTTCCTTTGCATGAGGATATCGCAAGGAATGAAGTTTTGACAAACGATGATGTTTTGGGAGATCCTTTACCTTCAAATCAACTGCATTCAATGCGACTAGAGTGTTATCAACTGCTTAAGTTAGGAAAAGGGGGAAAGGGAGTGCAGTTTCCTGGATCACATCCTGTTTCCCTCAATAGGGTCAATCTACAACTGTTAAGACAGCGGTATTACTATGCCACATGGAAAGCTGATGGGACACGGTATATGATGCTGATCACCTCGGATCGATGTTATTTGATTGACAGAAAATTTCATTTTCGAAAGGTCCAGATGCGGTTTCCTTGCAGATATTTGAGTGGGGGTACCCCTGAAAGGAATCACCACTACACGTTACTTGATGGTGAGATGATAATTGACATGGATCCACATACCCAAAAGCAGGAGAGAAGATACCTTATTTATGATCTGATGGCCATCAATCAAGTTTCTGTGACTGAGTTGCCTTTCTATGAACGTTGGAAATTGCTAGAGAAAGAAGTGATTGAACCTCGTAACATGGAACGTGAGGCTCTCTGCAAGAGTGTAAATCCTTATTATCGATATGACTTGGAGCCATTTAGTGTGAGGAGGAAGGGTTTTTGGTTACTGTCCACTGTTTCAAAACTTCTCCATAAATTCATTCCGCAACTATCCCATCCATCAGATGGTCTTGTGTTCCAGGGCTGGGATGATCCTTACGTGCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAAATGAATTCAGTTGATTTCCTCTTTGAGTTGGGAGCAGGGGGTCGTTGCCTGCTCTTTCTTTATGAACGTGGAAAGAAAAAGTTGATGGAAAGGAATAAGGTTTTCTTTAAAGATGTATCAGATATATCTTTCTATTCAGGGAAAATCATTGAATGCTACTGGGATTCCGAGGAGAAACATTGGGTCTGTATGCGAATAAGGACCGACAAATCAACTCCAAATGAGATCAACACTTATAGAAAGGTAATGCGTAGCATAAAGGATAACATAACAGAAGAAGTTGTATTGAATGAGATAAATGAGATCATACGCCTTCCCTTGTATGCGGACAGAATAGCAAGGGATATAAAGGCCCACCAACAGATGGTCTCTGCAAGGCGAAGATGA 1863 0.4069 MNGEEGRRDLKRKFPHVDRLQDHGSYDRLPPGWLGCPAYGQEIGCIIPSKVPLGESFDDIIPSQKYSPKQAIFQQRHLGREIGLVIDLTNSTRYYPISDWTKEKIRHVKIRCRGRDSVPDDESVKRFCNEVQGFLSQRTNTNKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINKFATARDPGIYKQDYIDALYMFYHERKPEEVVCPQTPEWKRLSDPEFQCAVDSAVENIGGVPLHEDIARNEVLTNDDVLGDPLPSNQLHSMRLECYQLLKLGKGGKGVQFPGSHPVSLNRVNLQLLRQRYYYATWKADGTRYMMLITSDRCYLIDRKFHFRKVQMRFPCRYLSGGTPERNHHYTLLDGEMIIDMDPHTQKQERRYLIYDLMAINQVSVTELPFYERWKLLEKEVIEPRNMEREALCKSVNPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHPSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFELGAGGRCLLFLYERGKKKLMERNKVFFKDVSDISFYSGKIIECYWDSEEKHWVCMRIRTDKSTPNEINTYRKVMRSIKDNITEEVVLNEINEIIRLPLYADRIARDIKAHQQMVSARRR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01870 620 Gene3D DNA ligase/mRNA capping enzyme 251 489 - -
Accr2g01870 620 FunFam mRNA capping enzyme family protein 25 235 - -
Accr2g01870 620 SUPERFAMILY Nucleic acid-binding proteins 492 604 IPR012340 -
Accr2g01870 620 CDD RNA_5'-triphosphatase 32 198 - -
Accr2g01870 620 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 217 IPR029021 -
Accr2g01870 620 PANTHER MRNA-CAPPING ENZYME 27 601 - -
Accr2g01870 620 FunFam mRNA capping enzyme family protein 488 597 - -
Accr2g01870 620 CDD Adenylation_mRNA_capping 287 490 IPR001339 GO:0004484|GO:0005524|GO:0006370
Accr2g01870 620 Pfam mRNA capping enzyme, catalytic domain 291 489 IPR001339 GO:0004484|GO:0005524|GO:0006370
Accr2g01870 620 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 283 490 - -
Accr2g01870 620 SMART dsp_5 62 202 IPR020422 GO:0006470|GO:0008138
Accr2g01870 620 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Accr2g01870 620 Gene3D Protein tyrosine phosphatase superfamily 8 223 IPR029021 -
Accr2g01870 620 Pfam mRNA capping enzyme, C-terminal domain 494 587 IPR013846 -
Accr2g01870 620 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 125 194 IPR000387 GO:0016311|GO:0016791
Accr2g01870 620 Pfam Dual specificity phosphatase, catalytic domain 80 200 IPR000340 GO:0008138|GO:0016311
Accr2g01870 620 FunFam mRNA capping enzyme, putative 251 487 - -
Accr2g01870 620 Gene3D - 490 582 IPR012340 -
Accr2g01870 620 PIRSF mRNA_capping_HCE 17 620 IPR017074 GO:0004484|GO:0006370|GO:0140818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01870 Accr-Chr2 52848548 52855670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01870 25 620 Protein tyrosine phosphatase (PTP) family AT3G09100 62.603 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01870 - K13917 gmx:100793183 1019.61